Os11g0162200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquinol-cytochrome c reductase complex 7.8 kDa protein (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7).
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Os11g0162200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquinol-cytochrome c reductase complex 7.8 kDa protein (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.93 | 0.239 | 12.6 | -1.38 | 0.185 | 0.701 | 0.0629 | -2.46 | -0.181 | 0.00209 | 9.637 | 1763 | -- | -- |
| 28.98 | 0.251 | 12.5 | -1.1 | 0.173 | 0.769 | 0.0907 | -- | -0.157 | 23.6 | -3.152 | 10781 | -- | -- |
| 25.95 | 0.237 | 12.6 | -1.39 | 0.186 | 0.702 | -- | -2.47 | -0.181 | 24 | 9.622 | 1756 | -- | -- |
| 28.95 | 0.251 | 12.5 | -1.1 | 0.168 | 0.772 | -- | -- | -0.159 | 23 | -1.894 | 11104 | -- | -- |
| 27.25 | 0.243 | 12.6 | -1.28 | -- | 0.785 | -- | -2.22 | -0.154 | -- | 5.48 | 993 | -- | -- |
| 38.56 | 0.291 | 12.5 | -0.618 | 0.195 | -- | 0.0789 | -- | 0.0897 | 23.4 | -- | -- | -- | -- |
| 38.58 | 0.291 | 12.5 | -0.621 | 0.195 | -- | -- | -- | 0.0894 | 23.4 | -- | -- | -- | -- |
| 30.66 | 0.258 | 12.5 | -1.1 | -- | 0.795 | -- | -- | -0.162 | -- | -1.906 | 10937 | -- | -- |
| 46.83 | 0.32 | 12.5 | -- | 0.284 | 0.426 | -- | -- | 0.108 | 0.378 | -1.894 | 11104 | -- | -- |
| 40.96 | 0.299 | 12.5 | -0.616 | -- | -- | -- | -- | 0.0914 | -- | -- | -- | -- | -- |
| 48.75 | 0.327 | 12.5 | -- | 0.188 | -- | -- | -- | 0.159 | 23.2 | -- | -- | -- | -- |
| 48.14 | 0.323 | 12.5 | -- | -- | 0.28 | -- | -- | 0.158 | -- | 26.4 | 2327 | -- | -- |
| 50.97 | 0.333 | 12.5 | -- | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.38 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 2 | 23.59 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 4 | 23.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 5 | 23.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 14 | 24.04 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 25 | 24.28 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 27 | 24.37 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 28 | 24.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 33 | 24.48 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 34 | 24.49 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 43 | 24.54 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 48 | 24.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 14 |
| 51 | 24.56 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 63 | 24.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 78 | 24.63 | humidity | 90 | 14400 | < th | dose independent | sin | 11 | NA |
| 81 | 24.63 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 88 | 24.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 101 | 24.67 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 103 | 24.68 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 118 | 24.69 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 182 | 24.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 18 |
| 211 | 24.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 19 |
| 253 | 24.82 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 270 | 24.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 394 | 24.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 430 | 24.97 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 447 | 24.98 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 472 | 25.01 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 475 | 25.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 536 | 25.07 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 565 | 25.09 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 593 | 25.10 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 19 |
| 628 | 25.13 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 718 | 25.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 720 | 25.20 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 761 | 25.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 797 | 25.26 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 915 | 25.36 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 933 | 25.38 | radiation | 40 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 940 | 25.38 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 960 | 25.39 | radiation | 40 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 988 | 25.41 | radiation | 40 | 4320 | < th | dose independent | rect. | 3 | 6 |