Os11g0160100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os11g0160100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.07 | 0.278 | 8.9 | 1.49 | 0.195 | 1.12 | -0.156 | 0.00593 | 0.394 | 20.3 | 29.53 | 261 | -- | -- |
| 35.06 | 0.276 | 8.9 | 1.49 | 0.193 | 1.11 | -0.157 | -- | 0.393 | 20.3 | 29.52 | 257 | -- | -- |
| 35.13 | 0.276 | 8.9 | 1.5 | 0.197 | 1.13 | -- | 0.0264 | 0.392 | 20 | 29.62 | 256 | -- | -- |
| 35.13 | 0.276 | 8.9 | 1.5 | 0.196 | 1.14 | -- | -- | 0.393 | 19.9 | 29.66 | 252 | -- | -- |
| 36.16 | 0.28 | 8.9 | 1.48 | -- | 1.04 | -- | -0.0662 | 0.374 | -- | 29.5 | 125 | -- | -- |
| 52 | 0.338 | 8.95 | 1.21 | 0.285 | -- | -0.178 | -- | 0.165 | 2.02 | -- | -- | -- | -- |
| 52.12 | 0.338 | 8.95 | 1.22 | 0.285 | -- | -- | -- | 0.166 | 2.07 | -- | -- | -- | -- |
| 36.15 | 0.28 | 8.9 | 1.47 | -- | 1.04 | -- | -- | 0.372 | -- | 29.5 | 123 | -- | -- |
| 87.94 | 0.439 | 8.97 | -- | 0.153 | 0.55 | -- | -- | 0.0958 | 2.04 | 59.73 | 114 | -- | -- |
| 57 | 0.353 | 8.95 | 1.23 | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
| 91.17 | 0.447 | 8.98 | -- | 0.308 | -- | -- | -- | 0.0301 | 2.16 | -- | -- | -- | -- |
| 88.85 | 0.44 | 8.96 | -- | -- | 0.729 | -- | -- | 0.118 | -- | 42.6 | 2 | -- | -- |
| 96.85 | 0.459 | 8.98 | -- | -- | -- | -- | -- | 0.036 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 7 | 34.06 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 14 | 34.41 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 15 | 34.47 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 27 | 35.10 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 31 | 35.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 79 | 36.06 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 102 | 36.31 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 132 | 36.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 138 | 36.54 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 208 | 36.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 221 | 36.93 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 230 | 36.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 240 | 36.99 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 241 | 36.99 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 245 | 37.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 277 | 37.07 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 286 | 37.09 | temperature | 25.0 | 720 | < th | dose dependent | sin | 0 | NA |
| 289 | 37.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 290 | 37.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 321 | 37.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 326 | 37.16 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 331 | 37.17 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 356 | 37.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 358 | 37.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 383 | 37.29 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 412 | 37.33 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 439 | 37.37 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 453 | 37.39 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 472 | 37.42 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 499 | 37.45 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 568 | 37.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 611 | 37.62 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 640 | 37.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 648 | 37.68 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 675 | 37.72 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 705 | 37.76 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 707 | 37.76 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 22 | 2 |
| 717 | 37.76 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 756 | 37.83 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 781 | 37.87 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 794 | 37.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 800 | 37.90 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 824 | 37.92 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 827 | 37.92 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 876 | 37.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 888 | 37.98 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 902 | 37.99 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 918 | 38.00 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 947 | 38.03 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 959 | 38.04 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 973 | 38.05 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 7 | NA |