Os11g0155100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0155100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.2 | 0.655 | 9.82 | -2.9 | 1.73 | 2.13 | 0.714 | -5.98 | -0.358 | 3.18 | 26.67 | 1224 | -- | -- |
| 201.61 | 0.661 | 9.66 | -1.54 | 1.75 | 1.46 | 0.676 | -- | -0.123 | 3.19 | 26.74 | 1213 | -- | -- |
| 195.78 | 0.652 | 9.82 | -2.87 | 1.73 | 2.11 | -- | -5.76 | -0.349 | 3.11 | 26.7 | 1224 | -- | -- |
| 202.14 | 0.662 | 9.66 | -1.5 | 1.74 | 1.44 | -- | -- | -0.0809 | 3.09 | 26.97 | 1211 | -- | -- |
| 349.59 | 0.871 | 9.87 | -3 | -- | 2.66 | -- | -5.39 | -0.653 | -- | 24.4 | 1164 | -- | -- |
| 290.41 | 0.799 | 9.65 | -1.06 | 1.96 | -- | 0.811 | -- | -0.0517 | 2.86 | -- | -- | -- | -- |
| 292.62 | 0.801 | 9.65 | -1.08 | 1.96 | -- | -- | -- | -0.0562 | 2.81 | -- | -- | -- | -- |
| 359.73 | 0.883 | 9.71 | -1.65 | -- | 2.14 | -- | -- | -0.284 | -- | 24.5 | 1165 | -- | -- |
| 257.9 | 0.748 | 9.59 | -- | 1.75 | 1.2 | -- | -- | 0.215 | 3.04 | 28.41 | 1171 | -- | -- |
| 515.24 | 1.06 | 9.65 | -0.998 | -- | -- | -- | -- | -0.00609 | -- | -- | -- | -- | -- |
| 323.47 | 0.841 | 9.63 | -- | 1.94 | -- | -- | -- | 0.0642 | 2.8 | -- | -- | -- | -- |
| 426.46 | 0.962 | 9.66 | -- | -- | 1.78 | -- | -- | -0.0491 | -- | 24.9 | 1165 | -- | -- |
| 541.53 | 1.09 | 9.62 | -- | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 199.45 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 2 | 201.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 8 | 201.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 25 | 202.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 38 | 202.59 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 88 | 203.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 194 | 204.02 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 212 | 204.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 256 | 204.65 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 276 | 205.08 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 289 | 205.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 303 | 205.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 311 | 205.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 315 | 205.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 324 | 205.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 18 |
| 338 | 206.19 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 343 | 206.24 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 364 | 206.34 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 369 | 206.49 | temperature | 30 | 1440 | < th | dose independent | sin | 16 | NA |
| 374 | 206.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 384 | 206.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 387 | 206.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 391 | 206.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 396 | 206.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 405 | 206.86 | temperature | 30 | 1440 | > th | dose independent | sin | 15 | NA |
| 406 | 206.86 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 423 | 206.94 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 433 | 206.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 436 | 206.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 438 | 207.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 447 | 207.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 456 | 207.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 486 | 207.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 492 | 207.06 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 509 | 207.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 566 | 207.22 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 596 | 207.49 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 598 | 207.50 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 633 | 207.58 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 645 | 207.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 658 | 207.74 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 675 | 207.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 677 | 207.79 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 725 | 207.95 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 756 | 207.95 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 18 |
| 837 | 208.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 840 | 208.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 848 | 208.11 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 875 | 208.21 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 881 | 208.24 | wind | 5 | 43200 | > th | dose independent | sin | 0 | NA |
| 887 | 208.31 | wind | 5 | 43200 | < th | dose independent | sin | 1 | NA |
| 931 | 208.51 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 932 | 208.55 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 943 | 208.65 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 947 | 208.68 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 13 |
| 954 | 208.73 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 962 | 208.78 | wind | 5 | 43200 | > th | dose dependent | sin | 23 | NA |
| 964 | 208.79 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 965 | 208.79 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 971 | 208.85 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 974 | 208.86 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 975 | 208.87 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 979 | 208.91 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 19 |