Os11g0147100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0147100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.01 | 0.465 | 9.62 | -0.451 | 0.64 | -1.09 | 1.59 | 1.51 | -0.0372 | 2.57 | 26.4 | 6036 | -- | -- |
| 95.95 | 0.456 | 9.64 | -0.678 | 0.682 | -0.994 | 1.65 | -- | 0.0151 | 2.47 | 26.5 | 11803 | -- | -- |
| 106.98 | 0.482 | 9.61 | -0.463 | 0.645 | -1.08 | -- | 1.59 | -0.0398 | 2.71 | 26.42 | 6033 | -- | -- |
| 104.14 | 0.475 | 9.64 | -0.778 | 0.683 | -0.978 | -- | -- | -0.00381 | 2.81 | 26.4 | 11795 | -- | -- |
| 119.81 | 0.513 | 9.68 | -1.14 | -- | -0.671 | -- | 0.0376 | -0.194 | -- | 26.6 | 4688 | -- | -- |
| 129.78 | 0.534 | 9.73 | -1.31 | 0.648 | -- | 1.5 | -- | -0.399 | 2.74 | -- | -- | -- | -- |
| 137.56 | 0.549 | 9.73 | -1.35 | 0.656 | -- | -- | -- | -0.408 | 2.9 | -- | -- | -- | -- |
| 119.81 | 0.512 | 9.68 | -1.15 | -- | -0.67 | -- | -- | -0.197 | -- | 26.6 | 4688 | -- | -- |
| 104.61 | 0.476 | 9.62 | -- | 0.745 | -1.38 | -- | -- | 0.179 | 2.7 | 22.6 | 24213 | -- | -- |
| 162.37 | 0.595 | 9.73 | -1.32 | -- | -- | -- | -- | -0.391 | -- | -- | -- | -- | -- |
| 185.65 | 0.637 | 9.7 | -- | 0.629 | -- | -- | -- | -0.258 | 2.88 | -- | -- | -- | -- |
| 130.71 | 0.532 | 9.61 | -- | -- | -1.35 | -- | -- | 0.174 | -- | 21.6 | 21820 | -- | -- |
| 208.52 | 0.674 | 9.7 | -- | -- | -- | -- | -- | -0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 2 | 94.84 | temperature | 20 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 4 | 94.87 | temperature | 20 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 8 | 94.92 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 10 | 94.96 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 31 | 95.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 51 | 95.31 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 81 | 95.44 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 92 | 95.48 | temperature | 20 | 14400 | > th | dose dependent | sin | 9 | NA |
| 98 | 95.52 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 114 | 95.59 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 5 |
| 127 | 95.62 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 131 | 95.64 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 148 | 95.67 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 179 | 95.74 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 199 | 95.79 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 207 | 95.81 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 231 | 95.87 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 232 | 95.87 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 254 | 95.92 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 291 | 95.99 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 438 | 96.26 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 450 | 96.28 | temperature | 20 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 451 | 96.29 | temperature | 25 | 14400 | < th | dose independent | sin | 23 | NA |
| 461 | 96.29 | temperature | 20 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 532 | 96.38 | temperature | 25 | 14400 | > th | dose independent | sin | 23 | NA |
| 664 | 96.54 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 747 | 96.66 | temperature | 25 | 14400 | < th | dose independent | rect. | 12 | 11 |
| 793 | 96.73 | temperature | 25 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 860 | 96.82 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 861 | 96.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 13 |
| 883 | 96.86 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 895 | 96.88 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 943 | 96.93 | temperature | 20 | 14400 | > th | dose independent | sin | 12 | NA |
| 948 | 96.93 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 1 |