Os11g0143500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to L-Galactono-1,4-lactone dehydrogenase.
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Os11g0143500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to L-Galactono-1,4-lactone dehydrogenase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.45 | 0.368 | 8.4 | 1.45 | 0.474 | 0.906 | 1.19 | -10.5 | -0.469 | 14.1 | 29.7 | 3991 | -- | -- |
| 72.13 | 0.399 | 8.63 | -0.409 | 0.363 | -0.27 | 0.921 | -- | -0.686 | 13.7 | 29.7 | 3991 | -- | -- |
| 66.75 | 0.381 | 8.4 | 1.43 | 0.475 | 0.891 | -- | -10.2 | -0.47 | 14.1 | 29.74 | 3989 | -- | -- |
| 74.85 | 0.403 | 8.62 | -0.404 | 0.457 | -0.315 | -- | -- | -0.634 | 13.6 | 29.8 | 4664 | -- | -- |
| 79.5 | 0.415 | 8.4 | 1.53 | -- | 0.95 | -- | -10.2 | -0.394 | -- | 29.5 | 3656 | -- | -- |
| 74.62 | 0.405 | 8.63 | -0.372 | 0.448 | -- | 1.03 | -- | -0.692 | 14 | -- | -- | -- | -- |
| 78.66 | 0.415 | 8.63 | -0.341 | 0.448 | -- | -- | -- | -0.687 | 13.8 | -- | -- | -- | -- |
| 80.37 | 0.419 | 8.63 | -0.424 | -- | -0.45 | -- | -- | -0.703 | -- | 29.5 | 3656 | -- | -- |
| 78.43 | 0.415 | 8.61 | -- | 0.388 | -0.356 | -- | -- | -0.618 | 13.5 | 30.3 | 4102 | -- | -- |
| 90.81 | 0.445 | 8.63 | -0.359 | -- | -- | -- | -- | -0.697 | -- | -- | -- | -- | -- |
| 81.72 | 0.423 | 8.62 | -- | 0.454 | -- | -- | -- | -0.649 | 13.8 | -- | -- | -- | -- |
| 85.06 | 0.431 | 8.62 | -- | -- | -0.419 | -- | -- | -0.656 | -- | 29.5 | 3656 | -- | -- |
| 94.21 | 0.453 | 8.62 | -- | -- | -- | -- | -- | -0.657 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.66 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 2 | 59.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 3 | 59.91 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 4 | 59.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 11 | 60.42 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 12 | 60.47 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 14 | 60.48 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 15 | 60.53 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 17 | 60.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 30 | 60.95 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 38 | 61.08 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 42 | 61.14 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 45 | 61.21 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 48 | 61.27 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 58 | 61.36 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 61 | 61.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 67 | 61.44 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 76 | 61.57 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 85 | 61.62 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 86 | 61.63 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 166 | 62.05 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 181 | 62.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 193 | 62.15 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 194 | 62.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 197 | 62.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 200 | 62.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 215 | 62.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 221 | 62.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 247 | 62.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 306 | 62.42 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 309 | 62.43 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 321 | 62.45 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 331 | 62.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 369 | 62.55 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 381 | 62.57 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 387 | 62.59 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 391 | 62.59 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 392 | 62.59 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 395 | 62.60 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 457 | 62.67 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 461 | 62.67 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 513 | 62.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 528 | 62.75 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 561 | 62.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 575 | 62.80 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 592 | 62.82 | wind | 5.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 596 | 62.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 623 | 62.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 639 | 62.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 644 | 62.87 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 717 | 62.94 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 754 | 62.97 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 807 | 63.00 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 808 | 63.00 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 858 | 63.04 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 873 | 63.05 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 916 | 63.09 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 976 | 63.13 | temperature | 30.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 997 | 63.15 | humidity | 70.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 998 | 63.15 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 5 |