BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0143500 Os11g0143500|AK102697
(583 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47930.1 | chr3:17684500-17687426 FORWARD LENGTH=611 759 0.0
AT1G32300.1 | chr1:11651342-11653365 FORWARD LENGTH=596 64 3e-10
AT5G56490.1 | chr5:22871507-22873420 FORWARD LENGTH=578 58 1e-08
AT2G46740.1 | chr2:19205182-19207455 REVERSE LENGTH=591 53 4e-07
AT2G46760.1 | chr2:19213028-19215166 REVERSE LENGTH=604 52 9e-07
AT2G46750.1 | chr2:19208443-19210909 REVERSE LENGTH=592 51 1e-06
>AT3G47930.1 | chr3:17684500-17687426 FORWARD LENGTH=611
Length = 610
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/523 (69%), Positives = 421/523 (80%), Gaps = 7/523 (1%)
Query: 62 SFPLPPDALHKKAVPFKYAPLPDDLHAVSNWSATHEVHTRVLLQXXXXXXXXXXXXXXXG 121
SFP P +A HKKA F+YAPLP+DLH VSNWS THEV TR Q
Sbjct: 85 SFPFPENAKHKKAQIFRYAPLPEDLHTVSNWSGTHEVQTRNFNQPENLADLEALVKESHE 144
Query: 122 ECRKLRPLGSGLSPNGLALSRAGMVNLALMDKVLGVDAKKKTVTVQAGIRVAELVDALRE 181
+ ++RP+GSGLSPNG+ LSR+GMVNLALMDKVL VD +KK VTVQAGIRV +LVDA+++
Sbjct: 145 KKLRIRPVGSGLSPNGIGLSRSGMVNLALMDKVLEVDKEKKRVTVQAGIRVQQLVDAIKD 204
Query: 182 HGLTLQNFASIREQQVGGIIQVGAHGTGARLPPIDEQVISMKLVTPAKGTIELSREKDPD 241
+GLTLQNFASIREQQ+GGIIQVGAHGTGARLPPIDEQVISMKLVTPAKGTIELSREKDP+
Sbjct: 205 YGLTLQNFASIREQQIGGIIQVGAHGTGARLPPIDEQVISMKLVTPAKGTIELSREKDPE 264
Query: 242 LFYLARCGLGGLGVVAEVTLQCVERHQLIEHTFVSNADEVKKNHKKWLSENKHIKYLWIP 301
LF+LARCGLGGLGVVAEVTLQCV RH+L+EHT+VSN E+KKNHKK LS NKH+KYL+IP
Sbjct: 265 LFHLARCGLGGLGVVAEVTLQCVARHELVEHTYVSNLQEIKKNHKKLLSANKHVKYLYIP 324
Query: 302 YTDTVVVVQCNPPSRWRTP-KFTSKYGKDEAIQHVRDLYHESLKKYRTK------AESND 354
YTDTVVVV CNP S+W P K KY DEA+QHVRDLY ES+ KYR + +S++
Sbjct: 325 YTDTVVVVTCNPVSKWSGPPKDKPKYTTDEAVQHVRDLYRESIVKYRVQDSGKKSPDSSE 384
Query: 355 PEVDQLSFTEXXXXXXXXXXXXXXHVIRINKAEAEYWKKSEGYRMGWSDEILGFDCGGQQ 414
P++ +LSFTE HV ++N+AEAE+WKKSEGYR+GWSDEILGFDCGGQQ
Sbjct: 385 PDIQELSFTELRDKLLALDPLNDVHVAKVNQAEAEFWKKSEGYRVGWSDEILGFDCGGQQ 444
Query: 415 WVSETCFPAGTLAKPNMKDLDYIEELLQLIEKEDIPAPAPIEQRWTACXXXXXXXXXXXQ 474
WVSE+CFPAGTLA P+MKDL+YIEEL +LIEKE IPAPAPIEQRWTA
Sbjct: 445 WVSESCFPAGTLANPSMKDLEYIEELKKLIEKEAIPAPAPIEQRWTARSKSPISPAFSTS 504
Query: 475 EDDIFSWVGIIMYLPTSDARQRKEITEEFFNYRSKTQTNLWDGYSAYEHWAKIEVPKDKD 534
EDDIFSWVGIIMYLPT+D RQRK+IT+EFF+YR TQ LWD +SAYEHWAKIE+PKDK+
Sbjct: 505 EDDIFSWVGIIMYLPTADPRQRKDITDEFFHYRHLTQKQLWDQFSAYEHWAKIEIPKDKE 564
Query: 535 ELAELQARLRKRFPVDAYNKARMELDPNKVLSNAKLEKLFPVT 577
EL LQAR+RKRFPVDAYNKAR ELDPN++LSN +EKLFPV+
Sbjct: 565 ELEALQARIRKRFPVDAYNKARRELDPNRILSNNMVEKLFPVS 607
>AT1G32300.1 | chr1:11651342-11653365 FORWARD LENGTH=596
Length = 595
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 145 MVNLALMDKVLGVDAKKKTVTVQAGIRVAELVDALREHGLTLQNFASIREQQVGGIIQVG 204
+++ ++ V+G + + KT+TV++G+ + +L+ E L L + VGG++ G
Sbjct: 100 LISTKFLNNVVGTNPEAKTLTVESGVTLRQLIGEAAELELALPHAPYWWGLTVGGLMGTG 159
Query: 205 AHGTG--ARLPPIDEQVISMKLVTP---AKGTIE---LSREKDPDLFYLARCGLGGLGVV 256
AHG+ + + + V +++V+P + G ++ LS DPD F A+ LG LGV+
Sbjct: 160 AHGSSLWGKGSAVHDYVSEIRMVSPGLASDGYVKVRVLSETIDPDEFRAAKVSLGVLGVI 219
Query: 257 AEVTLQCVERHQLIEHTFVSNADEVKKNHKKWLSENKHIKYLWIPYTDTVV 307
++VT Q + + N + + +++ +LW+P VV
Sbjct: 220 SQVTFQLQPMFKRSLTFVMQNDSDFGDQAVTFGEKHEFADFLWLPSQGKVV 270
>AT5G56490.1 | chr5:22871507-22873420 FORWARD LENGTH=578
Length = 577
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 145 MVNLALMDKVLGVDAKKKTVTVQAGIRVAELVDALREHGLTLQNFASIREQQVGGIIQVG 204
+++ ++ V+ + + KT+TV++G+ + +L++ + L L VGG++ G
Sbjct: 99 LISTKFLNHVVTTNPEAKTLTVESGVTLRQLIEEAAKFDLALPYAPYWWGLTVGGMMGTG 158
Query: 205 AHGTG--ARLPPIDEQVISMKLVTP---AKGTIE---LSREKDPDLFYLARCGLGGLGVV 256
AHG+ + + + V ++LV+P + G ++ LS DP+ F A+ LG LGV+
Sbjct: 159 AHGSSLWGKGSAVHDYVTEIRLVSPGLASDGYVKVQVLSETIDPEEFRAAKVSLGVLGVI 218
Query: 257 AEVTLQCVERHQLIEHTFVSNADEVKKNHKKWLSENKHIKYLWIPYTDTVV 307
++VT + + + + N + + ++ +LW+P VV
Sbjct: 219 SQVTFELQPMFKRSLNYVMRNDSDFGDQAVSFGERHEFADFLWLPSQGKVV 269
>AT2G46740.1 | chr2:19205182-19207455 REVERSE LENGTH=591
Length = 590
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 145 MVNLALMDKVLGVDAKKKTVTVQAGIRVAELVDALREHGLTLQNFASIREQQVGGIIQVG 204
++ ++ + DAK T+TV++G+ + +L+ + GL L VGG++ G
Sbjct: 113 FISTKFLNHTVQADAKAMTLTVESGVTLRQLIAEAAKVGLALPYAPYWWGVTVGGMMGTG 172
Query: 205 AHGTG--ARLPPIDEQVISMKLVTPAKGTIE--------LSREKDPDLFYLARCGLGGLG 254
AHG+ + + + V +++V+P G++ LS P+ F A+ LG LG
Sbjct: 173 AHGSSLWGKGSAVHDYVTEIRMVSP--GSVNDGFAKIRVLSETTTPNEFNAAKVSLGVLG 230
Query: 255 VVAEVTLQCVERHQLIEHTFVSNADEVKKNHKKWLSENKHIKYLWIPYTDTVV 307
V+++VT + + + N + + +++ ++W+P VV
Sbjct: 231 VISQVTFELQPMFKRSLKYVMRNDLDFNDEALTFGKKHEFADFVWLPSQGKVV 283
>AT2G46760.1 | chr2:19213028-19215166 REVERSE LENGTH=604
Length = 603
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 145 MVNLALMDKVLGVDAKKKTVTVQAGIRVAELVDALREHGLTLQNFASIREQQVGGIIQVG 204
+++ ++ + DA T+TV++G+ + +L+ + GL L VGG++ G
Sbjct: 117 LISTKFLNHTVRTDATAMTLTVESGVTLRQLIAEAAKVGLALPYAPYWWGLTVGGMMGTG 176
Query: 205 AHGTG--ARLPPIDEQVISMKLVTPAK-----GTIELSREKD-PDLFYLARCGLGGLGVV 256
AHG+ + + + V +++V+P + + RE P F A+ LG LGV+
Sbjct: 177 AHGSSLWGKGSAVHDYVTEIRIVSPGSVNDGFAKVRVLRETTTPKEFNAAKVSLGVLGVI 236
Query: 257 AEVTLQCVERHQLIEHTFVSNADEVKKNHKKWLSENKHIKYLWIPYTDTVV 307
++VTL+ + + N + + +++ ++W+P VV
Sbjct: 237 SQVTLKLQPMFKRSLRYVMRNDSDFGDQAVTFGMKHEFADFIWLPSQGKVV 287
>AT2G46750.1 | chr2:19208443-19210909 REVERSE LENGTH=592
Length = 591
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 145 MVNLALMDKVLGVDAKKKTVTVQAGIRVAELVDALREHGLTLQNFASIREQQVGGIIQVG 204
++ ++ + DA T+TV++G+ + +L+ + GL L VGG++ G
Sbjct: 109 FISTKFLNHTVQADATAMTMTVESGMTLRQLIVEAAKVGLALPYAPYWWGLTVGGMMGTG 168
Query: 205 AHGTG--ARLPPIDEQVISMKLVTPAKGTIE--------LSREKDPDLFYLARCGLGGLG 254
AHG+ + + + V +++V+P G++ LS P+ F A+ LG LG
Sbjct: 169 AHGSSLWGKGSAVHDYVTEIRMVSP--GSVNEGFAKIRILSETTTPNEFNAAKVSLGVLG 226
Query: 255 VVAEVTLQCVERHQLIEHTFVSNADEVKKNHKKWLSENKHIKYLWIPYTDTVV 307
V+++VT + + + N + + + +++ ++W+P VV
Sbjct: 227 VISQVTFELQPMFKRSLTYTMRNDSDFEDQAVTFGKKHEFADFIWLPSQGKVV 279
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,106,705
Number of extensions: 440487
Number of successful extensions: 1017
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1011
Number of HSP's successfully gapped: 7
Length of query: 583
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 479
Effective length of database: 8,255,305
Effective search space: 3954291095
Effective search space used: 3954291095
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)