Os11g0140900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0140900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.81 | 0.257 | 8.75 | -0.575 | 0.473 | -1.04 | 0.128 | 0.0797 | -0.113 | 4.74 | 28.5 | 15 | -- | -- |
| 29.73 | 0.254 | 8.75 | -0.563 | 0.464 | -1.05 | 0.111 | -- | -0.114 | 4.73 | 27.84 | 14 | -- | -- |
| 29.78 | 0.254 | 8.75 | -0.574 | 0.471 | -1.06 | -- | 0.0807 | -0.124 | 4.69 | 27.95 | 13 | -- | -- |
| 29.77 | 0.254 | 8.75 | -0.561 | 0.457 | -1.04 | -- | -- | -0.117 | 4.74 | 27.74 | 13 | -- | -- |
| 37.27 | 0.284 | 8.74 | -0.474 | -- | -0.858 | -- | -0.153 | -0.0445 | -- | 25.06 | 2 | -- | -- |
| 44.94 | 0.314 | 8.7 | -0.314 | 0.292 | -- | 0.29 | -- | 0.111 | 7.84 | -- | -- | -- | -- |
| 45.18 | 0.315 | 8.7 | -0.307 | 0.293 | -- | -- | -- | 0.11 | 7.7 | -- | -- | -- | -- |
| 37.3 | 0.284 | 8.74 | -0.493 | -- | -0.844 | -- | -- | -0.0484 | -- | 25.07 | 2 | -- | -- |
| 37.14 | 0.285 | 8.73 | -- | 0.386 | -0.811 | -- | -- | -0.011 | 5.21 | 27.42 | 17 | -- | -- |
| 49.82 | 0.33 | 8.7 | -0.303 | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
| 47.67 | 0.323 | 8.69 | -- | 0.291 | -- | -- | -- | 0.144 | 7.78 | -- | -- | -- | -- |
| 43.27 | 0.306 | 8.72 | -- | -- | -0.687 | -- | -- | 0.0307 | -- | 25.18 | 2 | -- | -- |
| 52.24 | 0.337 | 8.7 | -- | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 3 | 29.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 4 | 30.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 8 | 30.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 30.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 11 | 30.34 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 12 | 30.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 14 | 30.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 21 | 30.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 31 | 30.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 33 | 31.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 45 | 31.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 46 | 31.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 52 | 31.27 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 58 | 31.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 96 | 31.59 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 100 | 31.60 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 126 | 31.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 134 | 31.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 142 | 31.68 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 222 | 31.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 248 | 32.03 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 260 | 32.07 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 269 | 32.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 309 | 32.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 310 | 32.21 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 312 | 32.21 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 315 | 32.22 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 319 | 32.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 322 | 32.23 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 338 | 32.25 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 351 | 32.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 374 | 32.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 376 | 32.29 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 501 | 32.49 | temperature | 25 | 10 | < th | dose dependent | sin | 21 | NA |
| 564 | 32.58 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 759 | 32.92 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 786 | 32.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 787 | 32.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 797 | 32.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 803 | 33.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 808 | 33.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 813 | 33.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 815 | 33.03 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 816 | 33.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 822 | 33.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 876 | 33.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 933 | 33.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 954 | 33.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 985 | 33.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |