Os11g0127800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SMAD/FHA domain containing protein.
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Os11g0127800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SMAD/FHA domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.6 | 0.52 | 12 | -1.63 | 3.11 | 0.158 | 1.51 | 4.67 | -0.582 | 7.91 | 1005 | 9 | -- | -- |
| 124.88 | 0.524 | 12 | -1.81 | 3.09 | 1.08 | 1.57 | -- | -0.547 | 7.89 | 1003 | 18 | -- | -- |
| 129.18 | 0.533 | 12 | -1.58 | 3.1 | 0.117 | -- | 4.85 | -0.587 | 7.94 | 1005 | 4 | -- | -- |
| 131.94 | 0.539 | 12 | -1.77 | 3.09 | 1.08 | -- | -- | -0.55 | 7.92 | 1003 | 3 | -- | -- |
| 652.57 | 1.2 | 12 | -1.61 | -- | 0.491 | -- | 2.71 | -0.519 | -- | 1004 | 12 | -- | -- |
| 139.85 | 0.554 | 12 | -1.7 | 3.09 | -- | 1.52 | -- | -0.604 | 7.92 | -- | -- | -- | -- |
| 146.64 | 0.567 | 12 | -1.65 | 3.09 | -- | -- | -- | -0.605 | 7.95 | -- | -- | -- | -- |
| 652.03 | 1.19 | 12.1 | -1.73 | -- | 1.07 | -- | -- | -0.515 | -- | 1002 | 2 | -- | -- |
| 212.24 | 0.679 | 11.9 | -- | 3.08 | 0.696 | -- | -- | -0.378 | 7.96 | 1003 | 2 | -- | -- |
| 665.53 | 1.21 | 12.1 | -1.62 | -- | -- | -- | -- | -0.565 | -- | -- | -- | -- | -- |
| 218.79 | 0.692 | 12 | -- | 3.07 | -- | -- | -- | -0.421 | 7.98 | -- | -- | -- | -- |
| 728.83 | 1.26 | 12 | -- | -- | 0.67 | -- | -- | -0.339 | -- | 1003 | 2 | -- | -- |
| 734.96 | 1.27 | 12 | -- | -- | -- | -- | -- | -0.385 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 2 | 114.69 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 19 |
| 3 | 114.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 7 | 115.48 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 9 | 115.64 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 21 |
| 29 | 116.83 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 42 | 117.45 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 10 | 15 |
| 53 | 118.14 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 55 | 118.16 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 59 | 118.34 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 68 | 118.69 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 70 | 118.74 | atmosphere | 1005.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 71 | 118.75 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 73 | 118.79 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 80 | 118.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 81 | 118.97 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 84 | 119.05 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 9 |
| 106 | 119.29 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 22 |
| 118 | 119.37 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 131 | 119.58 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 18 |
| 136 | 119.60 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 11 |
| 137 | 119.61 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 19 | 20 |
| 138 | 119.62 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 209 | 120.41 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 20 |
| 226 | 120.57 | temperature | 25.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 228 | 120.59 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 229 | 120.59 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 5 | 21 |
| 231 | 120.61 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 236 | 120.62 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 264 | 120.83 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 270 | 120.85 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 281 | 120.89 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 21 | 17 |
| 287 | 120.93 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 7 | 19 |
| 289 | 120.93 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 290 | 120.95 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 302 | 121.02 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 312 | 121.06 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 331 | 121.17 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 332 | 121.17 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 335 | 121.19 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 339 | 121.21 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 342 | 121.22 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 350 | 121.24 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 366 | 121.30 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 372 | 121.32 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 20 |
| 378 | 121.34 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 380 | 121.36 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 398 | 121.45 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 416 | 121.52 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 487 | 121.73 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 530 | 121.90 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 553 | 121.99 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 15 |
| 570 | 122.04 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 581 | 122.07 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 582 | 122.07 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 585 | 122.07 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 15 |
| 630 | 122.20 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 638 | 122.22 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 644 | 122.25 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 698 | 122.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 699 | 122.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 12 |
| 713 | 122.42 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 23 | 15 |
| 732 | 122.47 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 733 | 122.48 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 748 | 122.51 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 763 | 122.54 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 776 | 122.57 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 777 | 122.58 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 783 | 122.59 | temperature | 10.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 806 | 122.63 | temperature | 20.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 807 | 122.63 | atmosphere | 1005.0 | 10 | < th | dose dependent | no | NA | NA |
| 820 | 122.65 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 20 |
| 827 | 122.67 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 845 | 122.68 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 846 | 122.68 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 864 | 122.73 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 879 | 122.77 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 892 | 122.79 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 895 | 122.80 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 896 | 122.80 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 907 | 122.82 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 911 | 122.83 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 912 | 122.83 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 9 |
| 915 | 122.84 | temperature | 20.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 924 | 122.86 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 926 | 122.87 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 932 | 122.87 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 933 | 122.88 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 18 | NA |
| 935 | 122.88 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 942 | 122.89 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 12 |
| 946 | 122.90 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 16 | NA |
| 948 | 122.90 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 971 | 122.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 973 | 122.95 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 980 | 122.96 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |