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Os11g0127700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0135) R2 : 0.0133
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0703 (0.0284) R2dN8 : 0.0171 R2N8 : 0.0133
σ : 0.254
deviance : 29.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.92 0.187 12.4 -0.743 0.296 0.119 -0.139 -1.25 -0.0865 5.69 19.9 1723 -- --
18.03 0.198 12.4 -0.62 0.32 0.281 -0.113 -- -0.0519 5.61 18.8 9910 -- --
15.96 0.186 12.4 -0.746 0.298 0.121 -- -1.25 -0.0868 5.62 20 1704 -- --
16.92 0.192 12.4 -0.898 0.318 0.541 -- -- -0.128 5.66 15.4 42189 -- --
20.42 0.21 12.4 -0.741 -- 0.117 -- -1.27 -0.0817 -- 20.2 1598 -- --
20.38 0.212 12.4 -0.422 0.3 -- -0.161 -- 0.0167 5.79 -- -- -- --
20.44 0.212 12.4 -0.424 0.3 -- -- -- 0.0172 5.68 -- -- -- --
21.01 0.213 12.4 -0.851 -- 0.555 -- -- -0.0987 -- 16 24438 -- --
24.82 0.233 12.4 -- 0.292 0.3 -- -- 0.0607 5.75 15.4 42189 -- --
25.1 0.234 12.4 -0.414 -- -- -- -- 0.0244 -- -- -- -- --
25.17 0.235 12.4 -- 0.293 -- -- -- 0.0644 5.75 -- -- -- --
27.6 0.245 12.4 -- -- -0.208 -- -- 0.143 -- 22 47520 -- --
29.62 0.254 12.4 -- -- -- -- -- 0.0703 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.34 humidity 90 14400 < th dose independent rect. 21 15
2 15.35 humidity 90 14400 < th dose independent rect. 24 11
8 15.36 humidity 90 14400 < th dose independent sin 7 NA
9 15.36 humidity 90 14400 < th dose independent rect. 18 16
52 15.41 humidity 90 14400 < th dose independent rect. 15 17
135 15.49 humidity 90 14400 < th dose independent no NA NA
136 15.49 humidity 90 14400 < th dose independent rect. 22 1
141 15.49 humidity 90 14400 < th dose independent rect. 5 23
149 15.51 humidity 90 14400 < th dose independent rect. 24 23
181 15.55 humidity 90 14400 < th dose independent rect. 18 8
199 15.56 humidity 90 14400 > th dose independent rect. 14 18
200 15.56 humidity 90 14400 > th dose independent rect. 21 18
216 15.57 humidity 90 14400 > th dose independent rect. 18 18
221 15.57 humidity 90 14400 > th dose independent rect. 18 21
226 15.58 humidity 90 14400 < th dose independent rect. 19 6
262 15.59 humidity 90 14400 > th dose independent rect. 21 15
285 15.59 humidity 90 14400 > th dose independent rect. 21 22
290 15.60 humidity 90 14400 > th dose independent sin 6 NA
291 15.60 radiation 30 4320 < th dose independent rect. 7 1
295 15.60 radiation 30 4320 < th dose independent rect. 23 9
299 15.60 humidity 90 14400 > th dose independent rect. 14 14
318 15.60 wind 3 43200 < th dose dependent rect. 5 9
320 15.61 humidity 90 14400 > th dose independent rect. 24 14
338 15.62 humidity 90 14400 > th dose independent no NA NA
339 15.62 wind 3 43200 > th dose independent rect. 2 1
341 15.62 humidity 90 14400 > th dose independent rect. 24 12
357 15.62 humidity 90 14400 > th dose independent rect. 5 23
363 15.62 humidity 90 14400 > th dose independent rect. 24 23
366 15.63 wind 3 43200 < th dose independent rect. 2 1
393 15.64 humidity 90 14400 > th dose independent sin 14 NA
398 15.64 humidity 90 14400 > th dose independent rect. 1 10
403 15.64 wind 3 43200 < th dose independent rect. 1 14
405 15.64 wind 3 43200 > th dose independent rect. 1 15
409 15.64 radiation 30 4320 < th dose independent rect. 16 16
444 15.66 radiation 30 4320 < th dose independent rect. 19 13
448 15.66 humidity 90 14400 > th dose independent rect. 2 23
507 15.69 humidity 80 14400 > th dose dependent rect. 22 13
529 15.71 humidity 90 14400 < th dose independent rect. 5 3
539 15.71 humidity 90 14400 > th dose dependent rect. 5 3
541 15.71 humidity 90 14400 > th dose dependent rect. 3 23
542 15.71 humidity 90 14400 > th dose dependent rect. 5 23
543 15.72 wind 3 43200 > th dose independent rect. 5 2
549 15.72 radiation 10 4320 < th dose independent rect. 17 13
576 15.73 wind 3 43200 < th dose dependent rect. 9 2
577 15.73 humidity 80 14400 > th dose dependent rect. 19 16
581 15.73 humidity 90 14400 > th dose dependent rect. 21 23
582 15.74 wind 3 43200 < th dose independent sin 3 NA
584 15.74 humidity 90 14400 > th dose independent rect. 22 1
597 15.74 wind 1 43200 > th dose dependent rect. 6 1
598 15.74 humidity 90 14400 > th dose dependent rect. 6 1
611 15.74 humidity 90 14400 > th dose dependent rect. 13 23
612 15.74 humidity 90 14400 > th dose dependent rect. 24 23
613 15.75 wind 3 43200 < th dose independent rect. 5 2
614 15.75 wind 3 43200 > th dose independent rect. 2 5
633 15.75 humidity 80 14400 > th dose dependent sin 7 NA
634 15.75 humidity 90 14400 > th dose dependent no NA NA
638 15.75 humidity 80 14400 > th dose dependent rect. 1 10
648 15.75 humidity 90 14400 > th dose dependent rect. 18 23
651 15.76 wind 3 43200 > th dose independent sin 3 NA
685 15.76 humidity 90 14400 > th dose dependent rect. 9 23
733 15.78 wind 3 43200 < th dose independent rect. 2 5
738 15.78 radiation 1 14400 > th dose independent rect. 18 12
742 15.78 wind 9 43200 < th dose dependent rect. 6 1
753 15.78 humidity 90 14400 > th dose dependent rect. 24 20
764 15.79 humidity 80 43200 > th dose independent rect. 4 1
783 15.79 humidity 90 14400 > th dose dependent sin 3 NA
785 15.79 wind 3 43200 < th dose dependent rect. 8 6
811 15.80 humidity 80 43200 < th dose independent rect. 24 1
835 15.80 humidity 90 14400 > th dose dependent rect. 13 14
845 15.81 wind 3 43200 < th dose independent rect. 1 3
858 15.81 wind 3 43200 < th dose dependent sin 3 NA
860 15.81 humidity 90 14400 > th dose dependent sin 16 NA
866 15.81 humidity 90 14400 > th dose dependent rect. 3 14
887 15.82 humidity 90 14400 < th dose independent rect. 5 6
905 15.82 humidity 90 14400 > th dose dependent rect. 16 10
915 15.82 wind 5 43200 < th dose dependent rect. 23 17
954 15.83 radiation 20 4320 > th dose dependent rect. 6 2