Os11g0118600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1191 family protein.
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Os11g0118600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1191 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 358.45 | 0.89 | 6.99 | -1.97 | 0.99 | 2.85 | 2.98 | 4.12 | -0.782 | 4.68 | 16.5 | 528 | -- | -- |
| 370.16 | 0.896 | 7.09 | -2.69 | 1.15 | 2.96 | 2.16 | -- | -1.01 | 3.98 | 16.8 | 438 | -- | -- |
| 369.24 | 0.895 | 6.96 | -1.67 | 0.213 | 2.28 | -- | 4.83 | -0.681 | 1.26 | 16.5 | 1095 | -- | -- |
| 383.68 | 0.912 | 7.09 | -2.66 | 1.04 | 2.86 | -- | -- | -0.984 | 4.19 | 16.79 | 486 | -- | -- |
| 371.69 | 0.898 | 6.97 | -1.76 | -- | 2.36 | -- | 4.41 | -0.707 | -- | 16.8 | 1074 | -- | -- |
| 489.46 | 1.04 | 7 | -1.98 | 0.607 | -- | 1.14 | -- | -0.516 | 0.945 | -- | -- | -- | -- |
| 494.41 | 1.04 | 7.01 | -2.02 | 0.608 | -- | -- | -- | -0.52 | 0.346 | -- | -- | -- | -- |
| 389.7 | 0.919 | 7.1 | -2.78 | -- | 2.44 | -- | -- | -0.984 | -- | 17.2 | 1045 | -- | -- |
| 550.49 | 1.09 | 7.01 | -- | 0.943 | 1.68 | -- | -- | -0.555 | 3.38 | 21.43 | 396 | -- | -- |
| 517.67 | 1.06 | 6.99 | -2 | -- | -- | -- | -- | -0.511 | -- | -- | -- | -- | -- |
| 601.76 | 1.15 | 6.96 | -- | 0.58 | -- | -- | -- | -0.296 | 0.164 | -- | -- | -- | -- |
| 561.4 | 1.1 | 6.99 | -- | -- | 1.35 | -- | -- | -0.515 | -- | 21.81 | 1064 | -- | -- |
| 622.95 | 1.16 | 6.94 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 351.59 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 18 | 355.11 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 19 |
| 58 | 357.25 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 70 | 358.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 14 |
| 75 | 358.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 77 | 358.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 89 | 358.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 93 | 358.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 94 | 358.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 95 | 358.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 106 | 358.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 20 |
| 121 | 358.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 124 | 359.11 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 184 | 360.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 214 | 360.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 219 | 360.89 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 9 | NA |
| 225 | 360.94 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 9 | NA |
| 226 | 360.94 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 9 | NA |
| 228 | 360.97 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 244 | 361.11 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 10 | NA |
| 263 | 361.40 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 275 | 361.49 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 291 | 361.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 301 | 361.70 | temperature | 15.0 | 720 | > th | dose dependent | no | NA | NA |
| 311 | 361.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 16 |
| 318 | 361.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 16 |
| 320 | 361.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 16 |
| 335 | 362.10 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 349 | 362.21 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 363 | 362.26 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 370 | 362.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 371 | 362.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 377 | 362.41 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 422 | 362.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 19 |
| 430 | 362.67 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 441 | 362.77 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 443 | 362.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 20 |
| 444 | 362.78 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 447 | 362.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 20 |
| 452 | 362.80 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 498 | 363.05 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 534 | 363.22 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 549 | 363.29 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 569 | 363.38 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 570 | 363.38 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 571 | 363.38 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 586 | 363.42 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 587 | 363.42 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 17 | 13 |
| 592 | 363.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 598 | 363.48 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 623 | 363.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 624 | 363.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 643 | 363.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 649 | 363.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 678 | 363.85 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 694 | 363.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 22 |
| 724 | 364.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 727 | 364.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 22 |
| 733 | 364.08 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 735 | 364.09 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 751 | 364.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 754 | 364.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 774 | 364.25 | temperature | 30.0 | 720 | < th | dose dependent | no | NA | NA |
| 838 | 364.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 849 | 364.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 854 | 364.50 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 873 | 364.54 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 891 | 364.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 924 | 364.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 925 | 364.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 23 |
| 933 | 364.70 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 940 | 364.71 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 949 | 364.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 953 | 364.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 958 | 364.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 979 | 364.78 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 983 | 364.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 988 | 364.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 990 | 364.82 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 991 | 364.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 998 | 364.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 22 |