Os11g0111800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0111800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.18 | 0.534 | 3.55 | 0.142 | 0.411 | -0.337 | 0.953 | -1.09 | -0.0328 | 19 | 1014 | 5728 | -- | -- |
| 133.85 | 0.539 | 3.52 | 0.376 | 0.401 | -0.464 | 1.01 | -- | 0.027 | 18.9 | 1014 | 4644 | -- | -- |
| 131.54 | 0.534 | 3.55 | 0.123 | 0.415 | -0.334 | -- | -1.11 | -0.0375 | 18.9 | 1014 | 5731 | -- | -- |
| 136.57 | 0.544 | 3.52 | 0.356 | 0.402 | -0.464 | -- | -- | 0.0296 | 18.9 | 1014 | 4600 | -- | -- |
| 140.51 | 0.552 | 3.54 | 0.112 | -- | -0.344 | -- | -1.11 | -0.0429 | -- | 1015 | 5757 | -- | -- |
| 140.99 | 0.557 | 3.54 | 0.355 | 0.414 | -- | 0.996 | -- | -0.0384 | 19 | -- | -- | -- | -- |
| 143.57 | 0.561 | 3.54 | 0.337 | 0.417 | -- | -- | -- | -0.0358 | 18.9 | -- | -- | -- | -- |
| 144.97 | 0.561 | 3.51 | 0.341 | -- | -0.496 | -- | -- | 0.0236 | -- | 1014 | 4480 | -- | -- |
| 139.74 | 0.551 | 3.53 | -- | 0.395 | -0.476 | -- | -- | -0.0128 | 19 | 1014 | 4360 | -- | -- |
| 152.7 | 0.577 | 3.53 | 0.328 | -- | -- | -- | -- | -0.0437 | -- | -- | -- | -- | -- |
| 146.56 | 0.566 | 3.55 | -- | 0.413 | -- | -- | -- | -0.0733 | 19 | -- | -- | -- | -- |
| 147.93 | 0.566 | 3.52 | -- | -- | -0.501 | -- | -- | -0.0156 | -- | 1014 | 4360 | -- | -- |
| 155.54 | 0.582 | 3.54 | -- | -- | -- | -- | -- | -0.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 117.87 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 4 | 117.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 5 | 117.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 8 | 119.34 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 14 | 121.66 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 19 | 122.00 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 24 | 123.05 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 25 | 123.27 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 28 | 123.79 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 34 | 124.34 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 58 | 125.39 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 6 |
| 71 | 126.14 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 73 | 126.17 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 80 | 126.24 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 89 | 126.25 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 92 | 126.28 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 93 | 126.32 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 154 | 126.41 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 9 | 4 |
| 201 | 126.78 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 259 | 127.06 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 268 | 127.41 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 320 | 128.23 | wind | 7.0 | 4320 | < th | dose independent | rect. | 24 | 2 |
| 337 | 128.48 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 357 | 128.83 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 372 | 129.19 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 375 | 129.24 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 387 | 129.28 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 390 | 129.28 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 410 | 129.33 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 423 | 129.36 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 433 | 129.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 565 | 129.71 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 568 | 129.72 | wind | 7.0 | 4320 | > th | dose independent | rect. | 23 | 3 |
| 575 | 129.73 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 588 | 129.76 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 611 | 129.80 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 632 | 129.84 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 643 | 129.85 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 682 | 129.90 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 729 | 129.98 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 7 |
| 730 | 129.98 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 4 | 11 |
| 756 | 130.02 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 0 | NA |
| 806 | 130.09 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 832 | 130.12 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 838 | 130.13 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 839 | 130.14 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 879 | 130.18 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 917 | 130.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |