Os11g0103100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0103100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.97 | 0.361 | 8.66 | 0.196 | 0.831 | -1.7 | -0.348 | 1.91 | -0.12 | 20.1 | 16.14 | 252 | -- | -- |
| 61.67 | 0.366 | 8.7 | -0.109 | 0.81 | -1.77 | -0.222 | -- | -0.209 | 20.1 | 12.21 | 228 | -- | -- |
| 59.3 | 0.359 | 8.66 | 0.201 | 0.812 | -1.67 | -- | 1.86 | -0.121 | 20.1 | 16.66 | 228 | -- | -- |
| 61.8 | 0.366 | 8.7 | -0.111 | 0.837 | -1.7 | -- | -- | -0.215 | 20.2 | 15 | 270 | -- | -- |
| 76.7 | 0.41 | 8.64 | 0.119 | -- | -1.59 | -- | 1.86 | -0.146 | -- | 16.66 | 228 | -- | -- |
| 94.39 | 0.455 | 8.75 | -0.493 | 0.674 | -- | -0.265 | -- | -0.459 | 22.6 | -- | -- | -- | -- |
| 94.67 | 0.456 | 8.75 | -0.482 | 0.675 | -- | -- | -- | -0.458 | 22.7 | -- | -- | -- | -- |
| 79.95 | 0.418 | 8.68 | -0.157 | -- | -1.67 | -- | -- | -0.225 | -- | 15 | 270 | -- | -- |
| 62.03 | 0.367 | 8.69 | -- | 0.839 | -1.78 | -- | -- | -0.189 | 20.1 | 15 | 249 | -- | -- |
| 122.81 | 0.518 | 8.73 | -0.469 | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
| 100.8 | 0.47 | 8.74 | -- | 0.672 | -- | -- | -- | -0.405 | 22.6 | -- | -- | -- | -- |
| 80.57 | 0.419 | 8.67 | -- | -- | -1.72 | -- | -- | -0.202 | -- | 15 | 270 | -- | -- |
| 128.62 | 0.529 | 8.72 | -- | -- | -- | -- | -- | -0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 58.04 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 5 | 58.35 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 6 | 58.41 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 11 | 58.78 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 12 | 58.85 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 16 | 59.18 | temperature | 15.0 | 270 | > th | dose dependent | no | NA | NA |
| 24 | 59.54 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 39 | 59.99 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 59 | 60.34 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 60 | 60.38 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 76 | 60.57 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 77 | 60.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 78 | 60.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 85 | 60.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 93 | 60.81 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 103 | 60.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 115 | 60.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 119 | 61.02 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 124 | 61.04 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 152 | 61.18 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 161 | 61.29 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 181 | 61.37 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 187 | 61.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 193 | 61.42 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 204 | 61.45 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 208 | 61.45 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 232 | 61.48 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 238 | 61.49 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 264 | 61.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 8 | 21 |
| 354 | 61.64 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 379 | 61.69 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 386 | 61.72 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 418 | 61.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 434 | 61.83 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 436 | 61.83 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 20 |
| 504 | 62.03 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 531 | 62.12 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 561 | 62.23 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 568 | 62.26 | wind | 9.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 583 | 62.29 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 597 | 62.33 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 651 | 62.47 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 676 | 62.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 729 | 62.68 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 748 | 62.72 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 749 | 62.72 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 789 | 62.80 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 804 | 62.81 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 843 | 62.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 891 | 62.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 930 | 62.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 933 | 62.94 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 968 | 62.98 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 980 | 62.99 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |