BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0103100 Os11g0103100|Os11g0103100
         (824 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os11g0103100  Conserved hypothetical protein                     1658   0.0  
Os12g0102700  Conserved hypothetical protein                     1494   0.0  

>Os11g0103100 Conserved hypothetical protein
          Length = 824

 Score = 1658 bits (4293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 808/824 (98%), Positives = 808/824 (98%)

Query: 1   MASPCRIPAATGNKENNISQNRHHVLDCQTPCEGKGAATSKKRKNKPAGGFNLRKSIAWN 60
           MASPCRIPAATGNKENNISQNRHHVLDCQTPCEGKGAATSKKRKNKPAGGFNLRKSIAWN
Sbjct: 1   MASPCRIPAATGNKENNISQNRHHVLDCQTPCEGKGAATSKKRKNKPAGGFNLRKSIAWN 60

Query: 61  PAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSRFGKSSNTSVLKEVGENSR 120
           PAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSRFGKSSNTSVLKEVGENSR
Sbjct: 61  PAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSRFGKSSNTSVLKEVGENSR 120

Query: 121 GKFPSKCLSAENKGRKLFASSKASEQDERKAPAGTQDKRSAKAVQKSIPRPPAGYKYPYG 180
           GKFPSKCLSAENKGRKLFASSKASEQDERKAPAGTQDKRSAKAVQKSIPRPPAGYKYPYG
Sbjct: 121 GKFPSKCLSAENKGRKLFASSKASEQDERKAPAGTQDKRSAKAVQKSIPRPPAGYKYPYG 180

Query: 181 DSGIIGYVLFFFLNRIMPLPAQIQRIPKKSEXXXXXXXXXXXXXXXXNVPKPTTRPATVT 240
           DSGIIGYVLFFFLNRIMPLPAQIQRIPKKSE                NVPKPTTRPATVT
Sbjct: 181 DSGIIGYVLFFFLNRIMPLPAQIQRIPKKSEPSPSVVSRSRSTSSVTNVPKPTTRPATVT 240

Query: 241 SERTHKVEGLPLESKTERSSVIKSSGPTIGKNMVPTVTAICQETNGSGKCETFSPYSQDN 300
           SERTHKVEGLPLESKTERSSVIKSSGPTIGKNMVPTVTAICQETNGSGKCETFSPYSQDN
Sbjct: 241 SERTHKVEGLPLESKTERSSVIKSSGPTIGKNMVPTVTAICQETNGSGKCETFSPYSQDN 300

Query: 301 PSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHSDNAQRNPERCFSGNISSLVKPP 360
           PSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHSDNAQRNPERCFSGNISSLVKPP
Sbjct: 301 PSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHSDNAQRNPERCFSGNISSLVKPP 360

Query: 361 RYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPATRDPNVLASSLPGVEDTNVRSLKQSLS 420
           RYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPATRDPNVLASSLPGVEDTNVRSLKQSLS
Sbjct: 361 RYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPATRDPNVLASSLPGVEDTNVRSLKQSLS 420

Query: 421 ESTVPYSEKSGNINYQEMPDDDFSLAGNGATTELSFRDNDGGRNIMPNECSVALSVGQDL 480
           ESTVPYSEKSGNINYQEMPDDDFSLAGNGATTELSFRDNDGGRNIMPNECSVALSVGQDL
Sbjct: 421 ESTVPYSEKSGNINYQEMPDDDFSLAGNGATTELSFRDNDGGRNIMPNECSVALSVGQDL 480

Query: 481 NAICCSSIEPAEDSCFLKVICSSSEPTVGRNLTTSCISSPGCTPNDLNSQSKSDNGETAV 540
           NAICCSSIEPAEDSCFLKVICSSSEPTVGRNLTTSCISSPGCTPNDLNSQSKSDNGETAV
Sbjct: 481 NAICCSSIEPAEDSCFLKVICSSSEPTVGRNLTTSCISSPGCTPNDLNSQSKSDNGETAV 540

Query: 541 DIENSLSGETSGTVCSSEGNNCTSATDSLRKSDSCHQQNMLVQSVHCTDQMPQFDSSTGI 600
           DIENSLSGETSGTVCSSEGNNCTSATDSLRKSDSCHQQNMLVQSVHCTDQMPQFDSSTGI
Sbjct: 541 DIENSLSGETSGTVCSSEGNNCTSATDSLRKSDSCHQQNMLVQSVHCTDQMPQFDSSTGI 600

Query: 601 KPSLAYSQLDSNTSLCSEVQLTSSEGPDIDSEMELDTDDAFTVEEPPLLHVGGECDHDYR 660
           KPSLAYSQLDSNTSLCSEVQLTSSEGPDIDSEMELDTDDAFTVEEPPLLHVGGECDHDYR
Sbjct: 601 KPSLAYSQLDSNTSLCSEVQLTSSEGPDIDSEMELDTDDAFTVEEPPLLHVGGECDHDYR 660

Query: 661 SAECSHMNLAAPSPRVDQKALAGNLTEKVDTADGRTESHHCSTQERRPILSEEQDTEDTI 720
           SAECSHMNLAAPSPRVDQKALAGNLTEKVDTADGRTESHHCSTQERRPILSEEQDTEDTI
Sbjct: 661 SAECSHMNLAAPSPRVDQKALAGNLTEKVDTADGRTESHHCSTQERRPILSEEQDTEDTI 720

Query: 721 EFDTKLSSSEGASSIERIKSVGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGEEVLEQKT 780
           EFDTKLSSSEGASSIERIKSVGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGEEVLEQKT
Sbjct: 721 EFDTKLSSSEGASSIERIKSVGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGEEVLEQKT 780

Query: 781 GAVQNSPTDKAAPEPSPWSPVKRKAQDVGPFDCTKYSKNVRTSD 824
           GAVQNSPTDKAAPEPSPWSPVKRKAQDVGPFDCTKYSKNVRTSD
Sbjct: 781 GAVQNSPTDKAAPEPSPWSPVKRKAQDVGPFDCTKYSKNVRTSD 824



>Os12g0102700 Conserved hypothetical protein
          Length = 814

 Score = 1494 bits (3869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 754/831 (90%), Positives = 765/831 (92%), Gaps = 24/831 (2%)

Query: 1   MASPCRIPAATG--NKENNISQNRHHVLDCQTPCEGKGAATSKKRKNKPAGGFNLRKSIA 58
           MASPCRIPAATG  NKENNISQNR HVLDCQTPCEGKG ATSKKRKNKPAGGFNLRKSIA
Sbjct: 1   MASPCRIPAATGSGNKENNISQNRRHVLDCQTPCEGKGVATSKKRKNKPAGGFNLRKSIA 60

Query: 59  WNPAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSRFGKSSNTSVLKEVGEN 118
           WNPAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSRFGKSSNTSVLKE+GEN
Sbjct: 61  WNPAFFTEQGVLDNTELSMLTGSQVKATRSPASGFSSTFSPLSRFGKSSNTSVLKEIGEN 120

Query: 119 SRGKFPSKCLSAENKGRKLFASSKASEQDERKAPAGTQDKRSAKAVQKSIPRPPAGYKYP 178
           SRGKFPSKCLSAENKGRKLFASSKASEQDERKA AGTQDKRSAKA+QKSIPRPPAGYK  
Sbjct: 121 SRGKFPSKCLSAENKGRKLFASSKASEQDERKALAGTQDKRSAKAIQKSIPRPPAGYKPK 180

Query: 179 Y--GDSGIIGYVLFFFLNRIMPLPAQIQRIPKKSEXXXXXXXXXXXXXXXXNVPKPTTRP 236
                SGI                AQIQRIPKKSE                NVPKPTTRP
Sbjct: 181 KVPNSSGI----------------AQIQRIPKKSEPSPSVVSRSRSTSSVTNVPKPTTRP 224

Query: 237 ATVTSERTHKVEGLPLESKTERSSVIKSSGPTIGKNMVP-TVTAICQETNGSGKCETFSP 295
           ATVTSE THKVEGLPL+SKTERSSV KSSGPTIGK+MVP TVT ICQETNGSGKCETFSP
Sbjct: 225 ATVTSECTHKVEGLPLKSKTERSSVTKSSGPTIGKDMVPPTVTTICQETNGSGKCETFSP 284

Query: 296 YSQDNPSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHSDNAQRNPERCFSGNISS 355
           YSQDNPSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHS  AQRNPERCFSGNISS
Sbjct: 285 YSQDNPSSSVVAPARISAKPSALRMPSPSVGFFTQGKASVSHSGTAQRNPERCFSGNISS 344

Query: 356 LVKPPRYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPATRD--PNVLASSLPGVEDTNVR 413
            VKPPRYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPAT D  PNVLASSLPGVED  V 
Sbjct: 345 -VKPPRYKQPVDPKSRFHLTKQLPTNFSAASSLPVQPATSDSTPNVLASSLPGVEDATVC 403

Query: 414 SLKQSLSESTVPYSEKSGNINYQEMPDDDFSLAGNGATTELSFRDNDGGRNIMPNECSVA 473
           SLKQSLSESTVPYSEKSGNI+YQEMPDDDFSLAGNGATTELSFRDND GRN MPNECSVA
Sbjct: 404 SLKQSLSESTVPYSEKSGNISYQEMPDDDFSLAGNGATTELSFRDNDDGRNSMPNECSVA 463

Query: 474 LSVGQDLNAICCSSIEPAEDSCFLKVICSSSEPTVGRNLTTSCISSPGCTPNDLNSQSKS 533
           LSVGQDLNAICCSS EPAEDSCFLKVICSSSEP+VG NLTTSCISSPGCTPNDLNSQSKS
Sbjct: 464 LSVGQDLNAICCSSTEPAEDSCFLKVICSSSEPSVGSNLTTSCISSPGCTPNDLNSQSKS 523

Query: 534 DNGETAVDIENSLSGETSGTVCSSEGNNCTSATDSLRKSDSCHQQNMLVQSVHCTDQMPQ 593
           DNGETAVDIENSLSGETSGTVCSSEGNNCTSATDSL+KSDSCHQQNMLVQS+HCTDQ+PQ
Sbjct: 524 DNGETAVDIENSLSGETSGTVCSSEGNNCTSATDSLQKSDSCHQQNMLVQSIHCTDQIPQ 583

Query: 594 FDSSTGIKPSLAYSQLDSNTSLCSEVQLTSSEGPDIDSEMELDTDDAFTVEEPPLLHVGG 653
           FDSSTGIKPSLAYSQLDSN SLCSEVQLTSSEGPDIDSEMELDTDD+FTVEEPPLLHVG 
Sbjct: 584 FDSSTGIKPSLAYSQLDSNNSLCSEVQLTSSEGPDIDSEMELDTDDSFTVEEPPLLHVGD 643

Query: 654 ECDHDYRSAECSHMNLAAPSPRVDQKALAGNLTEKVDTADGRTESHHCSTQERRPILSEE 713
           ECDHDYRSAECSHMNLAAPSP VDQ+ALAGNLTEKVDTADGRTESHHCSTQERRPILSEE
Sbjct: 644 ECDHDYRSAECSHMNLAAPSPCVDQEALAGNLTEKVDTADGRTESHHCSTQERRPILSEE 703

Query: 714 QDTEDTIEFDTKLSSSEGASSIERIKSVGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGE 773
           QDTED I FDTKLSSSEGASSIERIKSVGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGE
Sbjct: 704 QDTEDKIGFDTKLSSSEGASSIERIKSVGKSRTNTISKDHLKNLVPFTEEWLAVMEAFGE 763

Query: 774 EVLEQKTGAVQNSPTDKAAPEPSPWSPVKRKAQDVGPFDCTKYSKNVRTSD 824
           EVLEQKTGAVQNSPTDKAAPEPSPWSPVKRKAQDVGPFDCTKYSKNVRTSD
Sbjct: 764 EVLEQKTGAVQNSPTDKAAPEPSPWSPVKRKAQDVGPFDCTKYSKNVRTSD 814



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.309    0.125    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 29,530,755
Number of extensions: 1332520
Number of successful extensions: 3546
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3537
Number of HSP's successfully gapped: 2
Length of query: 824
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 715
Effective length of database: 11,344,475
Effective search space: 8111299625
Effective search space used: 8111299625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 160 (66.2 bits)