Os11g0101200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CONSTANS-like protein CO6 (Fragment).
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Os11g0101200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CONSTANS-like protein CO6 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.25 | 0.34 | 9.42 | 1.23 | 0.587 | -1.6 | 0.225 | 3.79 | 0.564 | 4.99 | 21.45 | 1358 | -- | -- |
| 63.85 | 0.372 | 9.5 | 0.597 | 0.471 | -1.92 | 0.0745 | -- | 0.472 | 5.08 | 10.65 | 7746 | -- | -- |
| 52.29 | 0.337 | 9.42 | 1.22 | 0.606 | -1.63 | -- | 3.87 | 0.558 | 4.82 | 21.42 | 1304 | -- | -- |
| 63.7 | 0.372 | 9.51 | 0.57 | 0.504 | -1.91 | -- | -- | 0.447 | 5.49 | 10.02 | 7538 | -- | -- |
| 59.78 | 0.36 | 9.4 | 1.36 | -- | -1.79 | -- | 4.25 | 0.631 | -- | 21.84 | 1834 | -- | -- |
| 123.4 | 0.521 | 9.62 | -0.4 | 0.494 | -- | 0.136 | -- | -0.0698 | 5.77 | -- | -- | -- | -- |
| 123.44 | 0.52 | 9.62 | -0.399 | 0.495 | -- | -- | -- | -0.0702 | 5.82 | -- | -- | -- | -- |
| 76.4 | 0.407 | 9.51 | 0.591 | -- | -1.91 | -- | -- | 0.467 | -- | 10.34 | 7707 | -- | -- |
| 69.7 | 0.389 | 9.54 | -- | 0.525 | -1.57 | -- | -- | 0.307 | 5.54 | -61.28 | 7379 | -- | -- |
| 136.16 | 0.545 | 9.63 | -0.384 | -- | -- | -- | -- | -0.0586 | -- | -- | -- | -- | -- |
| 127.64 | 0.528 | 9.61 | -- | 0.489 | -- | -- | -- | -0.0258 | 5.86 | -- | -- | -- | -- |
| 80.17 | 0.417 | 9.58 | -- | -- | -1.31 | -- | -- | 0.182 | -- | 21.22 | 4877 | -- | -- |
| 140.05 | 0.552 | 9.62 | -- | -- | -- | -- | -- | -0.0161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 2 | 50.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 14 | 50.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 59 | 51.72 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 93 | 52.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 160 | 53.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 286 | 53.97 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 306 | 54.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 325 | 54.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 367 | 54.68 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 542 | 55.64 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 543 | 55.64 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 567 | 55.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 624 | 56.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 680 | 56.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 734 | 56.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 997 | 57.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |