BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0101200 Os11g0101200|AK064386
(462 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308 76 4e-14
AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411 73 3e-13
AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242 73 3e-13
AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387 73 4e-13
AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294 72 6e-13
AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262 62 5e-10
AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252 62 6e-10
AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265 61 2e-09
AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619 57 2e-08
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 54 1e-07
AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469 53 4e-07
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 52 1e-06
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 52 1e-06
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 51 1e-06
AT2G46670.1 | chr2:19164589-19165233 REVERSE LENGTH=184 51 1e-06
AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327 51 1e-06
AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407 50 2e-06
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 50 2e-06
>AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 35/39 (89%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARN 390
I KYR+KRNQRNF K I YACRKTLADSRPR++GRFARN
Sbjct: 219 ISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARN 257
>AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411
Length = 410
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%)
Query: 336 VLSTGGGLVXXXXXXXIDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARN 390
L+ G L I +Y KRN+RNF+KKI YACRKTLADSRPRV+GRFA+N
Sbjct: 299 TLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKN 353
>AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242
Length = 241
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 355 YRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDDXXXXXXXQVEVSPATNNNVP 414
YRSKRN RNF+K+I Y CRKTLADSRPR++GRFARN QV+V A +V
Sbjct: 170 YRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDE----ISQQEQVDVMEAVVGDVD 225
Query: 415 EW 416
W
Sbjct: 226 TW 227
>AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387
Length = 386
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 36/50 (72%)
Query: 341 GGLVXXXXXXXIDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARN 390
G L I +Y KRN+RNF KKI YACRKTLADSRPRV+GRFA+N
Sbjct: 281 GKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 330
>AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 34/39 (87%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARN 390
I KYR+KR QRNF K I YACRKTLAD+RPRV+GRFARN
Sbjct: 196 ISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARN 234
>AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262
Length = 261
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 34/38 (89%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFAR 389
+ +YR+K+++RNF +KI YACRK LADS+PR++GRFA+
Sbjct: 218 LSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAK 255
>AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252
Length = 251
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNS 391
I +Y K+NQRNF+K I Y CRKTLAD R RV+GRFARN+
Sbjct: 143 IMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNN 182
>AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265
Length = 264
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 34/38 (89%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFAR 389
+ +Y++K+++RNF +KI YACRK LADS+PRV+GRFA+
Sbjct: 222 LSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAK 259
>AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619
Length = 618
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 28/36 (77%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFAR 389
K+R KRNQR FDKKI Y RK LA+ RPRVKG+F R
Sbjct: 539 KFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVR 574
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDDXXXXXXXQVEVSPA 408
+YR KR R F+K I YA RK A+SRPR+KGRFA+ + + V S A
Sbjct: 291 RYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAA 345
>AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469
Length = 468
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDD 394
K+R KR R FDKK+ Y RK LA+ RPRVKG+F R + D
Sbjct: 423 KFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNS 391
+ +YR KR R F+K I YA RK A+ RPR+KGRFA+ +
Sbjct: 343 VMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 382
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNS 391
+YR KR R F+K I YA RK A+ RPR+KGRFA+ +
Sbjct: 235 RYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 272
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFAR 389
+YR K+ R FDK I YA RK A+ RPR+KGRFA+
Sbjct: 284 RYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>AT2G46670.1 | chr2:19164589-19165233 REVERSE LENGTH=184
Length = 183
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDD 394
K+R KR R FDKK+ Y RK LA+ RPRVKG+F R + D
Sbjct: 138 KFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 178
>AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNS 391
+YR KR R F+KKI Y RK AD RPR+KGRF R S
Sbjct: 284 RYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
>AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407
Length = 406
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 352 IDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSS 392
+ +YR KR R F KKI Y RK A+ RPR+KGRF + SS
Sbjct: 361 VSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSS 401
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 354 KYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDD 394
+YR K+ R F+K I YA RK A+ RPR+KGRFA+ D
Sbjct: 292 RYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVD 332
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,853,285
Number of extensions: 348619
Number of successful extensions: 733
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 733
Number of HSP's successfully gapped: 18
Length of query: 462
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 360
Effective length of database: 8,310,137
Effective search space: 2991649320
Effective search space used: 2991649320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)