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Os10g0577800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Poly(ADP-ribose) polymerase, catalytic region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.016) R2 : 0.252
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.418 (0.0337) R2dN8 : 0.326 R2N8 : 0.252
σ : 0.301
deviance : 41.64
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.02 0.215 13.4 -0.416 0.56 -0.283 -0.521 0.479 0.317 2.42 19 49 -- --
21.68 0.217 13.4 -0.383 0.56 -0.357 -0.375 -- 0.325 2.45 19.01 120 -- --
21.88 0.218 13.4 -0.377 0.566 -0.291 -- 0.317 0.323 2.32 19.1 44 -- --
22.17 0.219 13.4 -0.342 0.566 -0.338 -- -- 0.329 2.36 19 52 -- --
36.46 0.281 13.4 -0.421 -- -0.246 -- 0.438 0.338 -- 19.4 1044 -- --
24.89 0.234 13.4 -0.262 0.507 -- -0.301 -- 0.377 2.57 -- -- -- --
25.21 0.235 13.4 -0.254 0.505 -- -- -- 0.379 2.51 -- -- -- --
36.86 0.283 13.4 -0.411 -- -0.423 -- -- 0.318 -- 18.4 2413 -- --
25.03 0.233 13.4 -- 0.538 -0.264 -- -- 0.381 2.4 18.91 23 -- --
40.22 0.296 13.4 -0.233 -- -- -- -- 0.392 -- -- -- -- --
26.91 0.243 13.4 -- 0.5 -- -- -- 0.408 2.51 -- -- -- --
32.52 0.266 13.3 -- -- 0.319 -- -- 0.478 -- 26.6 111 -- --
41.64 0.301 13.4 -- -- -- -- -- 0.418 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.36 radiation 10 4320 < th dose dependent rect. 24 5
3 20.84 radiation 10 4320 < th dose dependent rect. 4 1
4 20.89 temperature 20 90 < th dose independent sin 11 NA
5 20.91 temperature 20 90 > th dose independent sin 10 NA
12 20.98 humidity 90 14400 > th dose dependent rect. 5 3
20 21.02 humidity 90 14400 > th dose dependent rect. 6 1
24 21.03 humidity 90 14400 > th dose dependent rect. 4 6
27 21.07 temperature 20 90 < th dose independent rect. 19 12
28 21.07 temperature 20 270 > th dose independent rect. 17 15
29 21.07 temperature 20 10 < th dose dependent sin 8 NA
34 21.09 temperature 20 270 < th dose independent rect. 17 12
40 21.10 humidity 90 14400 > th dose independent rect. 5 2
41 21.10 humidity 90 14400 > th dose independent rect. 3 6
47 21.11 temperature 20 90 < th dose independent rect. 17 14
53 21.12 temperature 20 90 < th dose independent rect. 11 20
56 21.14 humidity 90 14400 < th dose independent rect. 6 1
58 21.15 temperature 20 90 < th dose independent rect. 21 10
72 21.16 temperature 20 90 < th dose independent rect. 15 16
84 21.18 temperature 20 10 < th dose independent rect. 22 8
88 21.18 humidity 90 14400 > th dose dependent sin 3 NA
89 21.18 humidity 90 14400 > th dose dependent rect. 3 11
90 21.18 humidity 90 14400 > th dose dependent rect. 3 13
91 21.18 humidity 90 14400 > th dose dependent rect. 3 23
97 21.19 humidity 90 14400 > th dose independent sin 6 NA
99 21.19 radiation 1 1440 < th dose independent rect. 10 2
103 21.19 radiation 1 1440 < th dose dependent rect. 10 2
110 21.19 humidity 90 14400 > th dose dependent rect. 1 22
125 21.20 humidity 90 14400 > th dose dependent rect. 3 16
134 21.20 humidity 90 14400 > th dose dependent rect. 12 23
135 21.20 humidity 90 14400 > th dose dependent rect. 21 23
137 21.21 radiation 1 1440 < th dose independent rect. 10 4
147 21.21 humidity 90 14400 > th dose dependent no NA NA
149 21.21 radiation 1 1440 < th dose dependent rect. 10 4
164 21.21 humidity 90 14400 > th dose dependent rect. 15 23
165 21.21 humidity 90 14400 > th dose dependent rect. 18 23
169 21.22 radiation 1 1440 < th dose independent rect. 13 1
170 21.22 radiation 1 1440 > th dose independent rect. 9 6
176 21.22 radiation 1 1440 < th dose dependent rect. 13 1
189 21.22 humidity 90 14400 > th dose dependent rect. 9 23
213 21.23 humidity 90 14400 > th dose independent rect. 18 17
214 21.23 humidity 90 14400 > th dose independent rect. 20 17
237 21.24 temperature 20 1440 > th dose independent rect. 6 1
246 21.24 humidity 90 14400 > th dose independent rect. 24 14
334 21.26 temperature 20 10 < th dose dependent rect. 12 19
345 21.27 radiation 1 1440 > th dose independent rect. 13 2
505 21.32 humidity 90 14400 > th dose independent no NA NA
517 21.32 humidity 90 14400 > th dose independent rect. 2 23
518 21.32 humidity 90 14400 > th dose independent rect. 9 23
527 21.32 temperature 20 90 < th dose dependent rect. 14 21
542 21.33 humidity 90 14400 > th dose independent rect. 24 23
552 21.34 humidity 90 14400 < th dose independent rect. 2 8
568 21.34 humidity 90 14400 > th dose independent rect. 5 23
571 21.34 humidity 90 14400 > th dose dependent sin 16 NA
575 21.34 humidity 90 14400 > th dose dependent rect. 12 15
579 21.34 humidity 90 14400 > th dose dependent rect. 9 18
586 21.35 humidity 90 14400 > th dose independent rect. 21 2
588 21.35 humidity 90 14400 < th dose independent rect. 3 6
633 21.36 humidity 90 14400 > th dose dependent rect. 13 13
668 21.37 humidity 90 14400 > th dose dependent rect. 15 11
704 21.38 temperature 20 90 < th dose dependent rect. 17 18
708 21.39 temperature 20 1440 < th dose independent rect. 6 1
721 21.39 temperature 20 10 < th dose dependent rect. 15 16
756 21.40 temperature 20 90 < th dose dependent rect. 11 20
759 21.41 humidity 90 14400 > th dose independent sin 14 NA
760 21.41 humidity 90 14400 < th dose independent sin 6 NA
762 21.41 humidity 90 14400 > th dose independent rect. 20 4
802 21.42 humidity 90 14400 < th dose independent rect. 24 12
806 21.42 humidity 90 14400 < th dose independent rect. 18 17
821 21.42 humidity 90 14400 > th dose dependent rect. 18 7
835 21.43 radiation 1 4320 < th dose independent rect. 24 5
891 21.44 humidity 90 14400 > th dose independent rect. 12 16
910 21.44 temperature 20 90 < th dose dependent rect. 23 12
977 21.46 humidity 90 14400 > th dose independent rect. 15 13
994 21.46 humidity 90 14400 > th dose dependent rect. 22 1