BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0577800 Os10g0577800|AK072769
(591 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32230.1 | chr1:11613427-11615894 FORWARD LENGTH=590 202 4e-52
AT2G35510.1 | chr2:14916898-14919198 REVERSE LENGTH=569 179 3e-45
AT1G23550.1 | chr1:8350912-8352232 FORWARD LENGTH=324 142 4e-34
AT1G70440.1 | chr1:26549354-26550520 REVERSE LENGTH=306 123 4e-28
AT5G62520.1 | chr5:25098071-25099264 FORWARD LENGTH=310 113 3e-25
AT3G47720.1 | chr3:17592771-17593966 FORWARD LENGTH=317 101 1e-21
>AT1G32230.1 | chr1:11613427-11615894 FORWARD LENGTH=590
Length = 589
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 176/307 (57%), Gaps = 16/307 (5%)
Query: 269 AVQKLLLQGLGTVLGSKDIVGIYRTPAVDNHKEFRYNLFKKQAEHTKCKRGNANVRYAWL 328
AV+K+ G + LG ++ + R + E R LF+KQ E TK RG+ANVRYAWL
Sbjct: 277 AVKKMFAVGTAS-LGHVPVLDVGRFSS--EIAEARLALFQKQVEITKKHRGDANVRYAWL 333
Query: 329 ACSKDAVDEMMLNGVMHFEKTVKCPDYGIGTILAPANCSNTCVNYSDVDENGIVHMMLCR 388
++ + +M+ G+ ++ YG+G L A+C Y DVDENG+ +M+LCR
Sbjct: 334 PAKREVLSAVMMQGLGVGGAFIRKSIYGVGIHLTAADCPYFSARYCDVDENGVRYMVLCR 393
Query: 389 VVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKNPQHYIVWDMNVNSHIYSEFVVTIKLPSR 448
V+MGN+E++ Q E +D+GVDDI++P++YIVW++N+N+HI+ EFVV KL
Sbjct: 394 VIMGNMELLRGDKAQFFSGGEEYDNGVDDIESPKNYIVWNINMNTHIFPEFVVRFKL--- 450
Query: 449 VKDSPATEEDCHNXXXXXXXXXXXXXXXXXXQDM--NLQASPALGGHYEAPMLGDKVERA 506
+ P E + +D+ L+++ G A +G R
Sbjct: 451 -SNLPNAEGNL------IAKRDNSGVTLEGPKDLPPQLESNQGARGSGSANSVGSSTTR- 502
Query: 507 PSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEFKSKKISRVDLVKKLRHIVGDRMLIST 566
P +PWMPF LFAAIS KV+ +M ++N+ Y++ + KK++R + V+KLR IVGD +L ST
Sbjct: 503 PKSPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRST 562
Query: 567 IMRLQDK 573
I LQ++
Sbjct: 563 ITTLQNQ 569
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 69 IIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTITEGEHQTHLFLLDF 128
+++ Y F + + KR+++ + GEW D P+ ++ ++ K E + H F+LDF
Sbjct: 76 LVRYYTYFKKTGIAKRVMMYENGEWNDLPEHVICAIQNELEEKSAAIEFKLCGHSFILDF 135
Query: 129 VHMTFIDSKTGLQRPIAWIDENGKQYFPEFFIEDK 163
+HM +D +TG + P+AWID GK +FPE + D+
Sbjct: 136 LHMQRLDMETGAKTPLAWIDNAGKCFFPEIYESDE 170
>AT2G35510.1 | chr2:14916898-14919198 REVERSE LENGTH=569
Length = 568
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 178/319 (55%), Gaps = 27/319 (8%)
Query: 264 QLAISAVQKLLLQGLGTVLGSKDIVGIYRTPAVDNHKEFRYNLFKKQAEHTKCKRGNANV 323
+L AV+++ G T LG + + +Y+ + + R +LF+KQA+ TK RG+AN+
Sbjct: 268 ELDKDAVKQMFALGAAT-LGHVESLDVYQFSS--EIAKARLSLFQKQADITKKHRGDANI 324
Query: 324 RYAWLACSKDAVDEMMLNGVMHFEKTVKCPDYGIGTILAPANCSNTCVNYSDVDENGIVH 383
RYAW+ K+ + +M++G+ +K YG+G + ANC Y D+D+NG+ H
Sbjct: 325 RYAWVPAKKEVLSAVMMHGLGVGGAFIKKSMYGVG--VHAANCPYFSARYCDIDDNGVRH 382
Query: 384 MMLCRVVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKNPQHYIVWDMNVNSHIYSEFVVTI 443
M+LCRV+MGN+E + + Q+ E +D+GVDD+++P+HY++W+MN+N+HIY EFVV+
Sbjct: 383 MVLCRVIMGNMEPLRGDNTQYFTGGEEYDNGVDDVESPKHYLIWNMNMNTHIYPEFVVSF 442
Query: 444 KL--PSRVKDSPATEEDCHNXXXXXXXXXXXXXXXXXXQDMNLQASPA-----LGGHYEA 496
KL P+ + T + H + SP+ +
Sbjct: 443 KLSIPNAEGNILPTTQSRHESSGLTLEGP--------------KGSPSNEPGRVSNGGSG 488
Query: 497 PMLGDKVERAPSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEFKSKKISRVDLVKKLRH 556
R P +P MPF +LF AIS+K++ ++MD++ + Y+E + KK+SR + K L
Sbjct: 489 SEKNSSSSRRPRSPIMPFPLLFKAISSKIARKDMDLIIAGYQELREKKVSRKEFYKTLSM 548
Query: 557 IVG-DRMLISTIMRLQDKL 574
IVG D +LISTI LQ L
Sbjct: 549 IVGDDDLLISTITGLQRSL 567
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 64 HFKMQIIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTITEGEHQTHL 123
H + +++ + + + +PKR++ + GEW D P I+ +D K+ E
Sbjct: 70 HVEKSLVRYFSYYKKTGVPKRVMFHENGEWIDLPDHILCDIRNDLEAKRATIEFNWCGRH 129
Query: 124 FLLDFVHMTFIDSKTGLQRPIAWIDENGKQYFPEFF 159
FLLDF+HM +D +TG++ +AWID GK +FPE F
Sbjct: 130 FLLDFLHMYRLDLETGVKTQLAWIDIAGKCFFPETF 165
>AT1G23550.1 | chr1:8350912-8352232 FORWARD LENGTH=324
Length = 323
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 145/308 (47%), Gaps = 61/308 (19%)
Query: 269 AVQKLLLQGLGTVLGSKDIVGIYRTPA----VDNHKEFRYNLFKKQAEHTKCKRGNANVR 324
++ LL G+G V IV I + + K + +F + G+ANV+
Sbjct: 57 VIKTCLLSGMGVVSSDTTIVTISKNSSERGITTRAKFLAFRIFTDAV--ARKHGGDANVK 114
Query: 325 YAWLACSKDAVDEMMLNG-----VMHFEKTVKCPDYGIGTILAPANCSNTCVNYSDVDEN 379
Y W A S+D + ++ G V FE +GIG L P+ CS + ++ DE
Sbjct: 115 YGWYAGSRDEIQRIISYGFSNRDVGKFEN--DGGSHGIGIHLVPSKCSLLAASATEQDEE 172
Query: 380 GIVHMMLCRVVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKNPQHYIVWDMNVNSHIYSEF 439
G+ +++LCRV++G EI+ GSKQ PS+ FDSGVDD+ NP++Y++W N+NS I +
Sbjct: 173 GLRYLLLCRVILGKPEIIISGSKQSYPSSAEFDSGVDDLHNPRNYVIWSCNMNSCILPSY 232
Query: 440 VVTIKLPSRVKDSPATEEDCHNXXXXXXXXXXXXXXXXXXQDMNLQASPALGGHYEAPML 499
+V+ + P R++ S GG P
Sbjct: 233 IVSFRSP-RLRVSR-------------------------------------GGFASRP-- 252
Query: 500 GDKVERAPSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEFKSKKISRVDLVKKLRHIVG 559
S+PW+ F+ L + +ST + M+++ Y++F+ +KI R LV+K+R + G
Sbjct: 253 --------SSPWVSFASLMSMLSTSMDPSRMNLIIRTYDDFRKRKIRRDQLVRKMREVAG 304
Query: 560 DRMLISTI 567
D +L I
Sbjct: 305 DNLLAEII 312
>AT1G70440.1 | chr1:26549354-26550520 REVERSE LENGTH=306
Length = 305
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 145/304 (47%), Gaps = 59/304 (19%)
Query: 270 VQKLLLQGLGTVLGSKDIVGIYR--TPAVDNHKEFRYNLFKKQAEHTKCKR-GNANVRYA 326
++ L G+G+ IV + + T + K ++ +FK E K K G AN+RY
Sbjct: 50 IKNCFLSGMGSFATETTIVTVRKILTQRLITTKA-KFAVFKLFTEAMKRKNNGYANIRYG 108
Query: 327 WLACSKDAVDEMMLNGVMHFE-KTVK--CPDYGIGTILAPANCSNTCVNYSDVDENGIVH 383
W + SK+ +D ++ G + E K V+ +G+G L S + DE GI +
Sbjct: 109 WYSGSKEEIDRVITYGFSNREIKKVENDVGSHGVGIHLVHHRYSLAAALVGEGDEEGIKN 168
Query: 384 MMLCRVVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKNPQHYIVWDMNVNSHIYSEFVVTI 443
++LCRV++G E + GSKQ PS+ FDSGVD+++NP+ Y++W N+NS+I ++V+
Sbjct: 169 ILLCRVILGKPEQIVTGSKQSYPSSNQFDSGVDNLENPRKYVIWSCNMNSYILPTYIVSF 228
Query: 444 KLPSRVKDSPATEEDCHNXXXXXXXXXXXXXXXXXXQDMNLQASPALGGHYEAPMLGDKV 503
K + +L +
Sbjct: 229 K---------------------------------------------------SHLLRGLI 237
Query: 504 ERAPSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEFKSKKISRVDLVKKLRHIVGDRML 563
RA S P + FS+L + +S + A M+++ + Y++F+ +K+ R LV+K+R +VGD +L
Sbjct: 238 GRARS-PCVSFSVLMSILSKSLDAARMNLILTSYDDFRKRKLRREQLVRKIREVVGDNLL 296
Query: 564 ISTI 567
+
Sbjct: 297 FKIL 300
>AT5G62520.1 | chr5:25098071-25099264 FORWARD LENGTH=310
Length = 309
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 54/265 (20%)
Query: 304 YNLFKKQAEHTKCKRGNANVRYAWLACSKDAVDEMMLNGVMHFEKTVKCPDYGIGTILAP 363
+ +F++ + G A V+Y W + SK + + G E +G G L+P
Sbjct: 89 FQVFQEAVQMKHGGDGGAKVKYGWCSVSKHELKTIFEYGFS--EPLRNDGSFGRGLYLSP 146
Query: 364 ANCSNTCVNYSDVD-ENGIVHMMLCRVVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKNPQ 422
N C+ S + E+G+ ++LCRV++G EIV GS + PS+ FDSGVDD+ + +
Sbjct: 147 DNSPLDCLKDSASESEDGMRFLLLCRVLLGKSEIVPQGSTRSCPSSPEFDSGVDDLVSTK 206
Query: 423 HYIVWDMNVNSHIYSEFVVTIKLPSRVKDSPATEEDCHNXXXXXXXXXXXXXXXXXXQDM 482
YIVW ++N+H+ EF+V IK P
Sbjct: 207 KYIVWSTHMNTHVLPEFLVCIKAP-----------------------------------F 231
Query: 483 NLQASPALGGHYEAPMLGDKVERAPSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEFKS 542
NL SP + +PWM F +L A+S + + ++ Y++ ++
Sbjct: 232 NLTRSP----------------KRLRSPWMAFPVLIKALSKFLPPSQILVIQKHYKDQQN 275
Query: 543 KKISRVDLVKKLRHIVGDRMLISTI 567
++I+R +L++++R I GD++L+ I
Sbjct: 276 RRITRSELIQRVRSITGDKLLVHII 300
>AT3G47720.1 | chr3:17592771-17593966 FORWARD LENGTH=317
Length = 316
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 67/256 (26%)
Query: 321 ANVRYAWLACSKDAVDEMMLNGVMHFEKTVKCPDYGIGTILAPANCSNTCV--NYSDVDE 378
A V+Y K+ + +++ G F C L+P N C+ S +E
Sbjct: 122 ARVKYGCCGVEKEELKAILMYG---FSNNALC--------LSPDNAPLQCMIDPSSSCNE 170
Query: 379 NGIVHMMLCRVVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKNPQHYIVWDMNVNSHIYSE 438
+GI ++ R++MG E+V S Q PS+ FDSGVD + +P YI+W ++N+H+ E
Sbjct: 171 DGISFLLFSRIIMGKSEVVCSTS-QSYPSSMEFDSGVDSLTSPNKYIIWSTHMNTHVLPE 229
Query: 439 FVVTIKLPSRVKDSPATEEDCHNXXXXXXXXXXXXXXXXXXQDMNLQASPALGGHYEAPM 498
FVV IK PS +K
Sbjct: 230 FVVCIKTPSILK------------------------------------------------ 241
Query: 499 LGDKVERAPSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEFKSKKISRVDLVKKLRHIV 558
+ P +PW+ F +L +IS ++ + +++ Y+E + ++ISR +L+++LR I
Sbjct: 242 -----RKNPKSPWISFPVLINSISKFLNQSQIRLIHKHYKEHQDRRISRCELIQRLRSIT 296
Query: 559 GDRMLISTIMRLQDKL 574
GD +L+ I + K+
Sbjct: 297 GDSLLVQIIKSVGQKV 312
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,991,157
Number of extensions: 545607
Number of successful extensions: 1107
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1102
Number of HSP's successfully gapped: 13
Length of query: 591
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 487
Effective length of database: 8,255,305
Effective search space: 4020333535
Effective search space used: 4020333535
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)