Os10g0565600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os10g0565600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.54 | 0.233 | 10.4 | -0.759 | 0.857 | -0.284 | -0.692 | -0.535 | -0.227 | 11.4 | 30.4 | 11 | -- | -- |
| 24.82 | 0.232 | 10.5 | -0.85 | 0.862 | -0.331 | -0.549 | -- | -0.244 | 11.5 | 38.28 | 12 | -- | -- |
| 26.08 | 0.24 | 10.5 | -0.881 | 0.868 | -0.255 | -- | 0.091 | -0.251 | 11.5 | 30.4 | 11 | -- | -- |
| 26.09 | 0.239 | 10.5 | -0.867 | 0.868 | -0.255 | -- | -- | -0.247 | 11.5 | 30.4 | 11 | -- | -- |
| 63.16 | 0.372 | 10.5 | -1.05 | -- | -0.97 | -- | 0.00366 | -0.384 | -- | 30.4 | 11 | -- | -- |
| 25.86 | 0.238 | 10.4 | -0.787 | 0.934 | -- | -0.506 | -- | -0.197 | 11.7 | -- | -- | -- | -- |
| 26.96 | 0.243 | 10.4 | -0.807 | 0.936 | -- | -- | -- | -0.199 | 11.8 | -- | -- | -- | -- |
| 63.06 | 0.371 | 10.5 | -1.05 | -- | -0.961 | -- | -- | -0.39 | -- | 29.9 | 11 | -- | -- |
| 31.38 | 0.261 | 10.4 | -- | 0.877 | 0.577 | -- | -- | 0.0581 | 11.7 | 23.53 | 47520 | -- | -- |
| 82.05 | 0.423 | 10.5 | -0.835 | -- | -- | -- | -- | -0.211 | -- | -- | -- | -- | -- |
| 44.14 | 0.311 | 10.4 | -- | 0.946 | -- | -- | -- | -0.109 | 11.8 | -- | -- | -- | -- |
| 84.89 | 0.429 | 10.4 | -- | -- | 0.635 | -- | -- | 0.0683 | -- | 27.91 | 47520 | -- | -- |
| 100.42 | 0.468 | 10.4 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.65 | temperature | 30.0 | 90 | < th | dose independent | rect. | 16 | 15 |
| 3 | 23.10 | wind | 5.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 5 | 23.15 | temperature | 30.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 8 | 23.30 | wind | 3.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 9 | 23.32 | humidity | 60.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 11 | 23.35 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 15 |
| 12 | 23.40 | humidity | 60.0 | 90 | > th | dose independent | rect. | 16 | 7 |
| 13 | 23.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 14 | 23.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 15 | 23.44 | wind | 3.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 20 | 23.47 | wind | 1.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 27 | 23.50 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 35 | 23.54 | wind | 1.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 38 | 23.56 | wind | 1.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 43 | 23.57 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 45 | 23.58 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 11 |
| 46 | 23.59 | wind | 3.0 | 10 | > th | dose independent | rect. | 16 | 3 |
| 48 | 23.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 11 |
| 50 | 23.60 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 52 | 23.60 | wind | 1.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 71 | 23.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 72 | 23.63 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 17 |
| 78 | 23.64 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 15 |
| 79 | 23.65 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 81 | 23.65 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 82 | 23.65 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 95 | 23.67 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 13 |
| 110 | 23.70 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 7 |
| 120 | 23.71 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 121 | 23.71 | humidity | 70.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 130 | 23.73 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 2 |
| 141 | 23.75 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 2 |
| 143 | 23.75 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 145 | 23.75 | wind | 9.0 | 90 | < th | dose independent | rect. | 23 | 17 |
| 146 | 23.75 | humidity | 70.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 152 | 23.75 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 18 |
| 155 | 23.76 | wind | 3.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 156 | 23.76 | wind | 3.0 | 90 | > th | dose independent | rect. | 16 | 7 |
| 157 | 23.76 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 161 | 23.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 15 |
| 177 | 23.78 | humidity | 60.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 179 | 23.78 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 17 |
| 190 | 23.78 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 17 |
| 193 | 23.79 | wind | 3.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 202 | 23.80 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 7 |
| 204 | 23.80 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 207 | 23.80 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 224 | 23.81 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 230 | 23.82 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 7 |
| 237 | 23.82 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 7 |
| 242 | 23.83 | radiation | 1.0 | 30 | < th | dose independent | sin | 21 | NA |
| 243 | 23.83 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 3 |
| 247 | 23.83 | radiation | 1.0 | 30 | > th | dose independent | rect. | 7 | 12 |
| 258 | 23.83 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 268 | 23.85 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 3 |
| 274 | 23.85 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 286 | 23.86 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 15 |
| 287 | 23.86 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 308 | 23.88 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 317 | 23.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 318 | 23.89 | humidity | 70.0 | 10 | > th | dose independent | sin | 13 | NA |
| 328 | 23.89 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 21 |
| 330 | 23.89 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 16 | 7 |
| 337 | 23.89 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 21 |
| 354 | 23.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 358 | 23.91 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 364 | 23.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 367 | 23.91 | radiation | 10.0 | 10 | < th | dose dependent | sin | 20 | NA |
| 369 | 23.91 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 408 | 23.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 409 | 23.93 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 2 |
| 416 | 23.93 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 17 |
| 420 | 23.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 3 |
| 427 | 23.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 429 | 23.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 23 |
| 432 | 23.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 455 | 23.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 23 |
| 479 | 23.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 500 | 23.96 | wind | 9.0 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 524 | 23.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 530 | 23.97 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 534 | 23.97 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 7 |
| 559 | 23.99 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 611 | 24.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 613 | 24.00 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 620 | 24.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 21 |
| 633 | 24.00 | wind | 1.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 635 | 24.00 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 646 | 24.01 | humidity | 60.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 654 | 24.01 | humidity | 60.0 | 270 | > th | dose independent | rect. | 21 | 17 |
| 658 | 24.01 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 19 |
| 660 | 24.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 20 |
| 675 | 24.02 | radiation | 20.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 710 | 24.02 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 722 | 24.03 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 735 | 24.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 737 | 24.03 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 743 | 24.03 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 749 | 24.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 15 |
| 769 | 24.04 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 20 |
| 786 | 24.05 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 793 | 24.05 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 19 |
| 795 | 24.05 | humidity | 50.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 796 | 24.05 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 19 |
| 801 | 24.05 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 814 | 24.05 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 19 |
| 834 | 24.06 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 849 | 24.06 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 874 | 24.07 | radiation | 10.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 911 | 24.08 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 17 |
| 930 | 24.08 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 951 | 24.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 5 |
| 953 | 24.09 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 16 | 5 |
| 955 | 24.09 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 5 |
| 961 | 24.09 | temperature | 25.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 966 | 24.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 19 |
| 967 | 24.09 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 19 |
| 968 | 24.09 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 19 |
| 975 | 24.09 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 978 | 24.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 3 |