BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0565600 Os10g0565600|AK103864
(844 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55250.1 | chr1:20607214-20612302 FORWARD LENGTH=901 679 0.0
AT2G44950.1 | chr2:18542602-18548247 REVERSE LENGTH=879 266 3e-71
AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250 52 9e-07
>AT1G55250.1 | chr1:20607214-20612302 FORWARD LENGTH=901
Length = 900
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/844 (43%), Positives = 537/844 (63%), Gaps = 3/844 (0%)
Query: 1 MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60
+DA LQ +NQKLVQQL+ QK ++ +E K +EL+ Q SYD+ LI +N++WNQL+DDL+
Sbjct: 60 VDATVLQLQNQKLVQQLDLQKKQLYDVESKIQELQLNQTSYDDELISVNQLWNQLVDDLI 119
Query: 61 LLGVRAGGDLNGLQALDHXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXXXKLVEEA 120
LLGVRAG + L LD + + VEEA
Sbjct: 120 LLGVRAGANQEALNYLDIVDKKRVPPCAADETFLCRLLQVDSLDTSKSDEVV--RKVEEA 177
Query: 121 LALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNL 180
LALR+S+T+ LM + Q+ ++ES+S +L+ S+ED + L + ND +KE NL
Sbjct: 178 LALRHSSTMELMGLFENTIDTQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNL 237
Query: 181 RQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCXXXXXXXXXXXXXXXRRKLAVLQLQT 240
R+ + ++ +H+++ ++I+A+ ++ S + E+K RRKL L++Q
Sbjct: 238 REMIDALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQK 297
Query: 241 GGGSLMNTSAPNGVNGSVSTDKSSDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLI 300
+ ++P NGS+S +K DK R+LKD+++E K +A RL EL +QE NL
Sbjct: 298 DAACEGHVTSPAIANGSLSPEKPVDKT-KLRELKDSIDEIKIMAEGRLSELQASQEYNLS 356
Query: 301 LSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEE 360
LS+Q +DI+++LKD+ YI +S+ Y++++D++HH NAE++RY+ L E +Q E+ +M++++
Sbjct: 357 LSRQCQDIENELKDDQYIYSSRLYSLINDRIHHWNAELDRYKILTEAIQAERSFVMRRDK 416
Query: 361 EMLAKAESVDAVQQSITTYKAKIEDLEHEIQKLMAEKNDLEIKAEEALQDSGKKDFKDEI 420
E+ +AES++A TT ++IE LE ++Q + EKN LE++ EEA+QDS ++D K E
Sbjct: 417 ELNLRAESLEAANHKTTTVGSRIEVLEKKLQSCIIEKNGLELETEEAIQDSERQDIKSEF 476
Query: 421 HVMAASLSKEMELLDNQMNRSKDXXXXXXXXXXXXDYLRTLLAKKIDEQKEISDRYNTQV 480
MA++LSKEME+++ Q+ R KD LR L+ K DEQK + D+ Q+
Sbjct: 477 IAMASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNKADEQKGLEDKCAKQM 536
Query: 481 TEIKSLKALIETLDQEKQELQFIVDMLGKXXXXXXXXXXXXXXXNRARKQAEYLRKCLEE 540
EIKSLKALIE L +EK +LQ + + + +A+ QAE L+ L+E
Sbjct: 537 AEIKSLKALIEKLLKEKLQLQNLASICTRECNDDRGLAEIKDSQRKAQAQAEELKNVLDE 596
Query: 541 HNLELRVKAANEAETACQQRLSIAEAELEDLRAKVDASERDVMKLKESIRIKEAEVDGHI 600
H LELRVKAA+E E+ACQ+RL+ A+AE+ +LR ++D SER+V++LKE I++KE E + I
Sbjct: 597 HFLELRVKAAHETESACQERLATAKAEIAELRTQLDLSEREVLELKEGIKVKEQEAEASI 656
Query: 601 SEIETIGQAYEDMQTQNQHLLQQVADRDDFNIKLVSDSVKMKQAYGSLLAEKNMLQKQLQ 660
+E+ETIGQAYEDMQTQNQHLLQQVA+RDD+NIKLVS+SVK K AY + L+EK +++KQL
Sbjct: 657 AEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKHAYNTHLSEKQVMEKQLH 716
Query: 661 HVNSSLESSKLKITSGEEQMKTYVAQAMKSSSENRHLAISLERTMLEVSDAEKELKWLRS 720
VN+S+E+ K +I EEQMK ++A K E+RHL ISLE T EV+DA+KE +WL+S
Sbjct: 717 QVNASVENFKARIAHNEEQMKGCFSEAYKLIQEDRHLVISLETTKWEVADADKEFRWLKS 776
Query: 721 ATGSAEKEYEINQKKIAELKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQKLQ 780
A S+EKEYE ++ ++K+ I +LQ
Sbjct: 777 AVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKELEELGSESVEAAIVRLQ 836
Query: 781 DEIKECKAILKCGVCFDRPKEVVITKCFHLFCSPCIQRNLEIRHRKCPGCGTPFGQSDVR 840
+E+K CK ILKCGVCFDRPKEVVI KC+HLFC CIQR+LEIRHRKCPGCGT FGQ+DVR
Sbjct: 837 EEVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLEIRHRKCPGCGTAFGQNDVR 896
Query: 841 EVKI 844
VK+
Sbjct: 897 LVKM 900
>AT2G44950.1 | chr2:18542602-18548247 REVERSE LENGTH=879
Length = 878
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 304/618 (49%), Gaps = 55/618 (8%)
Query: 255 NGSVSTDKSSDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKD 314
N ++D+ DK +D++ ++E LA+ RL +L E+ + ++ ++Q++ K
Sbjct: 288 NKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKS 347
Query: 315 ENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEEEMLAKAESVDAVQQ 374
I +S+ L DQL + +Y L+E LQ EKD ++ KE E+ K E D ++
Sbjct: 348 VRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVSRK 407
Query: 375 SITTYKAKIEDLEHEIQKLMAEKNDLEIKAEEALQDSGKKDFKDEIHVMAASLSKEMELL 434
+ +++ L+ EIQK + EK ++ + ++ G+K+ ++ + +S +EM +
Sbjct: 408 TSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSM 467
Query: 435 DNQMNRSKDXXXXXXXXXXXXDYLRTLLAKKIDEQKEISDRYNTQVTEIKSLKALIETLD 494
+Q+N K+ L +L +K E + + R +++ L A + L
Sbjct: 468 RSQLNNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNATVCDLK 527
Query: 495 QEKQELQFIVDMLGKXXXXXXXXXXXXXXXNRARKQAEYLRKCLEEHNLELRVKAANEAE 554
+EL+ +DM + RA + L+ L+E NLELRVKAANEAE
Sbjct: 528 NSHEELKLFLDMYKRESTDARDIAEAKEQEYRAWAHVQSLKSSLDEQNLELRVKAANEAE 587
Query: 555 TACQQRLSIAEAELEDLRAKVDASERDVMKLKESIRIKEAEVDGHISEIETIGQAYEDMQ 614
QQ L+ AEAE+ DLR K+D +RDV K + ++ K E ++SEI+TIG AYED+
Sbjct: 588 AVSQQMLAAAEAEIADLRQKMDDCKRDVAKHSDILKSKHEEHGTYLSEIQTIGSAYEDIV 647
Query: 615 TQNQHLLQQVADRDDFNIKLVSDSVKMKQAYGSLLAEKNMLQKQLQHVNSSLESSKLKIT 674
QNQ LL QV +RDD+NIKL + + +Q +LL +K ++ K +Q ++ K +
Sbjct: 648 PQNQQLLLQVTERDDYNIKLFLEGITSRQMQDTLLIDKYIMDKDIQQGSAYASFLSKKSS 707
Query: 675 SGEEQMKTYVAQAMKSSSENRHLAISLE----------------RTMLEVSDA------- 711
E+Q++ Q K + + ++SLE R+ LE S +
Sbjct: 708 RIEDQLRFCTDQFQKLAEDKYQKSVSLENLQKKRADIGNGLEQARSRLEESHSKVEQSRL 767
Query: 712 -----EKELKWLRSATGSAEKEYEINQKKIAELKMXXXXXXXXXXXXXXXXXXXXXXXXX 766
E EL+ R E+E EI +KK++ L+
Sbjct: 768 DYGALELELEIERFNRRRIEEEMEIAKKKVSRLR-------------------------- 801
Query: 767 XXXXXXXXXIQKLQDEIKECKAILKCGVCFDRPKEVVITKCFHLFCSPCIQRNLEIRHRK 826
IQKL+ E+ E K ILKC C DRPKEVVITKC+HLFC+PC+Q+ R +K
Sbjct: 802 -SLIEGSSAIQKLRQELSEFKEILKCKACNDRPKEVVITKCYHLFCNPCVQKLTGTRQKK 860
Query: 827 CPGCGTPFGQSDVREVKI 844
CP C FG +D++ + I
Sbjct: 861 CPTCSASFGPNDIKPIYI 878
>AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250
Length = 249
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 10/56 (17%)
Query: 792 CGVCFDRPKEVVITKCFHLFCSPCIQRNLEI----------RHRKCPGCGTPFGQS 837
C +C D +E V+T C HLFC PCI + L++ RHR+CP C + S
Sbjct: 48 CNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHS 103
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,832,256
Number of extensions: 508899
Number of successful extensions: 3416
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 3340
Number of HSP's successfully gapped: 55
Length of query: 844
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 737
Effective length of database: 8,173,057
Effective search space: 6023543009
Effective search space used: 6023543009
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)