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Os10g0564200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Homeodomain-like containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.014) R2 : 0.493
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.694 (0.0368) R2dC : 0.398 R2C : 0.38
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.262 (0.0295) R2dN8 : 0.113 R2N8 : 0.0951
σ : 0.265
deviance : 31.99
__
_____
C
peak time of C : 5.79
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.85 0.225 13.9 0.383 0.68 -0.483 -0.0293 -0.797 0.328 5.93 5.02 4432 -- --
23.3 0.225 13.9 0.39 0.684 -0.401 -0.0233 -- 0.316 5.82 5.2 4505 -- --
22.85 0.223 13.9 0.383 0.68 -0.483 -- -0.796 0.328 5.93 5.025 4432 -- --
23.21 0.224 13.9 0.382 0.672 -0.365 -- -- 0.314 5.93 5.3 4515 -- --
43.93 0.309 13.9 0.397 -- -0.6 -- -0.913 0.329 -- 5.1 4865 -- --
25.14 0.235 13.9 0.51 0.686 -- 0.00129 -- 0.318 5.82 -- -- -- --
25.14 0.235 13.9 0.51 0.686 -- -- -- 0.318 5.82 -- -- -- --
43.91 0.309 13.9 0.333 -- -0.66 -- -- 0.378 -- 4.8 4857 -- --
25.01 0.233 14 -- 0.707 -0.463 -- -- 0.229 5.75 7.423 33950 -- --
49.57 0.329 13.9 0.531 -- -- -- -- 0.334 -- -- -- -- --
31.99 0.265 13.9 -- 0.694 -- -- -- 0.262 5.79 -- -- -- --
46.27 0.317 13.9 -- -- -0.765 -- -- 0.399 -- 4.8 4869 -- --
57 0.352 14 -- -- -- -- -- 0.276 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.66 temperature 20 10 > th dose independent rect. 18 14
2 21.77 temperature 20 90 > th dose independent rect. 17 15
7 21.94 temperature 20 30 > th dose dependent rect. 18 14
14 22.03 temperature 20 270 > th dose independent rect. 15 15
36 22.34 humidity 90 270 < th dose independent rect. 1 14
37 22.34 temperature 20 10 > th dose independent rect. 17 19
38 22.36 humidity 90 270 < th dose independent rect. 23 16
43 22.39 wind 5 4320 > th dose independent sin 14 NA
44 22.39 wind 5 4320 > th dose independent rect. 16 13
47 22.40 wind 5 4320 < th dose independent rect. 16 13
48 22.40 temperature 30 270 < th dose dependent rect. 21 6
50 22.41 humidity 80 4320 < th dose independent rect. 22 1
57 22.42 wind 5 4320 < th dose independent sin 14 NA
61 22.43 wind 5 4320 > th dose independent rect. 14 17
73 22.46 wind 5 4320 < th dose independent rect. 14 17
98 22.49 temperature 20 10 > th dose independent rect. 2 23
100 22.50 wind 5 4320 < th dose independent rect. 20 1
104 22.50 temperature 30 90 < th dose dependent rect. 20 8
108 22.51 wind 5 4320 > th dose dependent sin 13 NA
115 22.52 wind 5 4320 > th dose dependent rect. 14 16
125 22.54 humidity 80 4320 > th dose independent rect. 22 2
131 22.55 humidity 80 4320 < th dose independent rect. 21 3
137 22.55 temperature 30 10 < th dose dependent rect. 21 8
150 22.57 wind 5 4320 > th dose independent rect. 20 1
153 22.57 wind 3 4320 > th dose dependent rect. 20 1
155 22.57 temperature 30 90 < th dose dependent rect. 23 5
195 22.62 temperature 30 270 < th dose dependent rect. 23 2
212 22.64 wind 5 4320 > th dose independent rect. 17 5
213 22.64 wind 5 4320 < th dose independent rect. 17 5
248 22.67 humidity 80 270 < th dose independent rect. 21 18
323 22.75 wind 5 4320 > th dose dependent rect. 20 8
328 22.76 wind 5 4320 > th dose independent rect. 17 1
333 22.76 humidity 90 270 < th dose independent rect. 5 10
350 22.77 humidity 80 270 > th dose dependent rect. 2 9
369 22.79 temperature 20 270 > th dose independent rect. 2 20
373 22.79 wind 5 4320 > th dose dependent rect. 14 8
377 22.80 wind 5 4320 < th dose independent rect. 17 1
390 22.81 temperature 25 270 < th dose independent rect. 23 2
395 22.81 temperature 20 10 > th dose independent rect. 15 21
409 22.82 humidity 50 270 > th dose dependent rect. 2 9
414 22.83 wind 1 43200 > th dose independent rect. 4 3
446 22.85 wind 7 4320 > th dose independent rect. 20 8
448 22.85 wind 7 4320 < th dose independent rect. 20 8
499 22.88 wind 5 4320 > th dose dependent rect. 20 4
506 22.88 humidity 80 270 > th dose dependent rect. 2 15
523 22.89 temperature 20 10 > th dose dependent sin 10 NA
536 22.90 temperature 25 90 < th dose independent rect. 21 7
552 22.90 humidity 80 270 > th dose dependent rect. 2 13
557 22.91 wind 9 90 < th dose independent rect. 7 10
565 22.91 temperature 25 10 < th dose dependent sin 8 NA
617 22.94 humidity 80 270 > th dose independent rect. 2 9
633 22.94 wind 5 4320 > th dose independent rect. 19 23
642 22.95 temperature 20 10 > th dose independent sin 8 NA
646 22.95 temperature 20 10 > th dose independent rect. 17 8
664 22.95 temperature 20 10 > th dose independent rect. 17 23
676 22.96 wind 1 30 > th dose independent rect. 1 16
690 22.96 wind 5 4320 > th dose independent rect. 23 23
693 22.96 temperature 25 720 < th dose dependent rect. 17 6
701 22.97 wind 5 4320 > th dose independent no NA NA
723 22.98 temperature 20 10 < th dose independent sin 8 NA
740 22.98 wind 5 4320 > th dose independent rect. 2 23
747 22.98 humidity 80 4320 < th dose dependent rect. 21 2
748 22.98 temperature 20 720 > th dose dependent rect. 18 5
750 22.98 radiation 40 270 < th dose dependent rect. 2 10
755 22.99 temperature 25 90 < th dose independent rect. 23 5
769 22.99 wind 3 4320 > th dose dependent rect. 17 5
796 23.00 wind 5 4320 < th dose independent rect. 6 23
799 23.00 wind 5 4320 < th dose independent rect. 19 23
805 23.00 temperature 10 90 > th dose dependent rect. 8 9
869 23.02 wind 5 4320 < th dose independent rect. 23 23
882 23.03 wind 5 4320 < th dose independent no NA NA
886 23.03 wind 1 90 > th dose independent rect. 7 10
889 23.03 humidity 90 270 > th dose independent rect. 2 15
894 23.03 temperature 20 90 > th dose independent rect. 4 19
899 23.03 wind 5 4320 > th dose independent rect. 16 23
905 23.03 wind 5 4320 > th dose dependent rect. 14 2
917 23.04 humidity 90 270 < th dose independent sin 4 NA
923 23.04 atmosphere 995 90 > th dose independent rect. 17 14
932 23.04 wind 5 4320 < th dose independent rect. 2 23
944 23.04 temperature 10 270 > th dose dependent rect. 6 9
957 23.05 wind 1 43200 < th dose independent rect. 4 3
959 23.05 temperature 25 270 < th dose independent rect. 21 5