Os10g0561900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dual specificity protein phosphatase domain containing protein.
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Os10g0561900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dual specificity protein phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.88 | 0.193 | 12.6 | -0.192 | 0.659 | -0.441 | 0.0513 | 0.434 | -0.0756 | 2.7 | 24.4 | 345 | -- | -- |
| 17.11 | 0.193 | 12.6 | -0.147 | 0.648 | -0.474 | 0.0798 | -- | -0.0367 | 2.64 | 23.68 | 335 | -- | -- |
| 16.89 | 0.191 | 12.6 | -0.196 | 0.66 | -0.438 | -- | 0.454 | -0.0766 | 2.7 | 24.4 | 344 | -- | -- |
| 17.08 | 0.192 | 12.6 | -0.13 | 0.66 | -0.522 | -- | -- | -0.0541 | 2.65 | 23.48 | 323 | -- | -- |
| 36.04 | 0.28 | 12.6 | -0.266 | -- | -0.652 | -- | 0.401 | -0.13 | -- | 27.6 | 1041 | -- | -- |
| 20.4 | 0.212 | 12.6 | -0.00186 | 0.622 | -- | 0.126 | -- | 0.0262 | 2.55 | -- | -- | -- | -- |
| 20.45 | 0.212 | 12.6 | -0.00511 | 0.622 | -- | -- | -- | 0.0254 | 2.54 | -- | -- | -- | -- |
| 36.19 | 0.28 | 12.6 | -0.204 | -- | -0.668 | -- | -- | -0.118 | -- | 27.1 | 1025 | -- | -- |
| 17.48 | 0.195 | 12.6 | -- | 0.659 | -0.46 | -- | -- | -0.0378 | 2.62 | 23.57 | 315 | -- | -- |
| 43.17 | 0.307 | 12.6 | 0.0213 | -- | -- | -- | -- | 0.041 | -- | -- | -- | -- | -- |
| 20.46 | 0.212 | 12.6 | -- | 0.622 | -- | -- | -- | 0.026 | 2.54 | -- | -- | -- | -- |
| 36.89 | 0.283 | 12.6 | -- | -- | -0.591 | -- | -- | -0.0748 | -- | 27.2 | 1026 | -- | -- |
| 43.18 | 0.307 | 12.6 | -- | -- | -- | -- | -- | 0.0386 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 5 | 16.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 6 | 16.41 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 8 | 16.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 9 | 16.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 10 | 16.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 13 | 16.48 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 15 | 16.49 | temperature | 25 | 270 | < th | dose dependent | sin | 9 | NA |
| 21 | 16.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 27 | 16.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 38 | 16.56 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 43 | 16.57 | temperature | 30 | 10 | < th | dose dependent | sin | 8 | NA |
| 151 | 16.75 | temperature | 10 | 10 | > th | dose dependent | sin | 9 | NA |
| 152 | 16.75 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |
| 161 | 16.76 | temperature | 15 | 720 | > th | dose dependent | sin | 13 | NA |
| 179 | 16.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 234 | 16.82 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 383 | 16.93 | temperature | 15 | 30 | > th | dose dependent | rect. | 17 | 16 |
| 456 | 16.98 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 561 | 17.03 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 755 | 17.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 769 | 17.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 788 | 17.16 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 790 | 17.16 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 813 | 17.17 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 843 | 17.18 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 955 | 17.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 974 | 17.25 | radiation | 30 | 90 | < th | dose independent | rect. | 23 | 23 |
| 980 | 17.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 8 |