Os10g0560200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Cys-rich family protein.
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Os10g0560200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function Cys-rich family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.81 | 0.481 | 5.86 | 0.955 | 1.07 | 1.97 | 0.281 | -2.68 | 0.837 | 7.12 | 8.484 | 616 | -- | -- |
| 109.2 | 0.487 | 5.81 | 1.4 | 1.05 | 1.93 | 0.845 | -- | 0.96 | 7.33 | 10.11 | 672 | -- | -- |
| 104.97 | 0.477 | 5.87 | 0.924 | 1.07 | 1.97 | -- | -2.91 | 0.828 | 7.1 | 7.655 | 609 | -- | -- |
| 111.14 | 0.491 | 5.81 | 1.42 | 1.04 | 1.89 | -- | -- | 0.963 | 7.32 | 10.09 | 676 | -- | -- |
| 126.68 | 0.524 | 5.9 | 0.885 | -- | 1.63 | -- | -2.36 | 0.828 | -- | 14.79 | 1366 | -- | -- |
| 154.51 | 0.583 | 5.75 | 1.88 | 0.596 | -- | 0.55 | -- | 1.25 | 6.75 | -- | -- | -- | -- |
| 155.28 | 0.584 | 5.75 | 1.89 | 0.599 | -- | -- | -- | 1.25 | 6.69 | -- | -- | -- | -- |
| 129.15 | 0.529 | 5.83 | 1.39 | -- | 1.61 | -- | -- | 0.968 | -- | 1.045 | 1372 | -- | -- |
| 157.01 | 0.584 | 5.87 | -- | 0.556 | 2.16 | -- | -- | 0.721 | 7.29 | 11.72 | 1415 | -- | -- |
| 173.99 | 0.616 | 5.76 | 1.9 | -- | -- | -- | -- | 1.27 | -- | -- | -- | -- | -- |
| 249.36 | 0.739 | 5.8 | -- | 0.623 | -- | -- | -- | 1.04 | 6.51 | -- | -- | -- | -- |
| 161.24 | 0.591 | 5.91 | -- | -- | 2.12 | -- | -- | 0.608 | -- | 6.446 | 7201 | -- | -- |
| 269.55 | 0.766 | 5.81 | -- | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 17 | 104.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 21 |
| 32 | 104.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 35 | 105.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 36 | 105.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 54 | 105.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 55 | 105.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 60 | 105.45 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 62 | 105.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 71 | 105.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 75 | 105.77 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 92 | 105.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 99 | 106.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 114 | 106.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 202 | 107.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 212 | 107.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 248 | 107.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 254 | 107.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 289 | 107.82 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 319 | 107.93 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 352 | 108.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 461 | 108.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 633 | 108.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 669 | 108.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 720 | 108.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 843 | 108.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 930 | 109.03 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 960 | 109.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |