BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0560200 Os10g0560200|AK069913
(235 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45010.1 | chr2:18568045-18569615 FORWARD LENGTH=245 288 2e-78
AT5G51400.1 | chr5:20878784-20880036 REVERSE LENGTH=242 259 1e-69
AT2G40935.1 | chr2:17083199-17084216 FORWARD LENGTH=191 72 2e-13
AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162 60 8e-10
AT1G49030.1 | chr1:18136794-18137846 FORWARD LENGTH=225 57 8e-09
AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191 56 2e-08
AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134 54 7e-08
AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185 53 1e-07
AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153 50 7e-07
AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153 50 9e-07
AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185 50 1e-06
AT1G58320.1 | chr1:21634123-21635303 REVERSE LENGTH=149 48 5e-06
AT2G37110.1 | chr2:15592689-15593726 FORWARD LENGTH=243 47 7e-06
>AT2G45010.1 | chr2:18568045-18569615 FORWARD LENGTH=245
Length = 244
Score = 288 bits (737), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 166/209 (79%), Gaps = 2/209 (0%)
Query: 14 SRYVQLTRDQDAPADEDIRPGELNLPAHFPQLEQRRCCECGQQLPESYEAPADEPWTTGI 73
SRYV+L ++Q AP +EDI PGELN P PQL R+C EC Q LPE+YE P+DE WTTGI
Sbjct: 8 SRYVKLRKEQ-APVEEDITPGELNQPIDVPQLNVRKCHECMQVLPETYEPPSDENWTTGI 66
Query: 74 CGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIALAILTVIFPG 133
GCAED ESC TG F PCVLFG N+EA+RE+IPWT PC CHAVCVEGG+ALA +T +F G
Sbjct: 67 FGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAVTALFSG 126
Query: 134 -IDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLHWCANCQE 192
IDP T+++I EGL F+WW+ Y+G+FRQ+LQ+KYHLK++PCD C+VHCCLHWCA CQE
Sbjct: 127 YIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHWCALCQE 186
Query: 193 HRERKGRLADNNANRNTIVNPPPMQEMSV 221
HRE K L+D A+ +T ++PPP+QEM+
Sbjct: 187 HREMKNHLSDTEASSSTTMDPPPVQEMNT 215
>AT5G51400.1 | chr5:20878784-20880036 REVERSE LENGTH=242
Length = 241
Score = 259 bits (661), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 151/215 (70%), Gaps = 3/215 (1%)
Query: 11 GHPSRYVQLTRDQDAPADEDIRPGELNLPAHFPQLEQRRCCECGQQLPESYEAPADEPWT 70
G PSRYV+LT++Q AP DE I PGELN P L +C ECGQ LPE++EAPADEPWT
Sbjct: 6 GAPSRYVKLTKEQ-APVDE-IHPGELNQPIEVSHLAVHKCNECGQPLPENFEAPADEPWT 63
Query: 71 TGICGCAEDTESCWTGSFFPCVLFGHNVEALR-EDIPWTTPCTCHAVCVEGGIALAILTV 129
TGI GC ED S W G F P VLFG E L E+ W C CH++ VEGG+ A +
Sbjct: 64 TGIFGCTEDMNSFWLGLFCPSVLFGRVYETLSDEETSWKKACICHSIVVEGGLTAASMLA 123
Query: 130 IFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLHWCAN 189
PGIDP TS+LI EGL+F WW+ YTG RQ LQRKYHL+++PCDPC+VHCCLH+CA
Sbjct: 124 CVPGIDPHTSLLIWEGLLFVWWMCGIYTGNVRQTLQRKYHLQNAPCDPCMVHCCLHFCAV 183
Query: 190 CQEHRERKGRLADNNANRNTIVNPPPMQEMSVVGN 224
CQEHRE K RL+DN T++NPPP+QEMS G+
Sbjct: 184 CQEHREMKNRLSDNFVMPMTVINPPPVQEMSASGD 218
>AT2G40935.1 | chr2:17083199-17084216 FORWARD LENGTH=191
Length = 190
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 62 EAPADEP--WTTGICGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVE 119
E+ D+P W++GIC C +D +SC G F PC +FG N E L + PC H C+
Sbjct: 38 ESTKDDPRQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGT-FAGPCLTH--CIS 94
Query: 120 GGIALAILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCL 179
+ I G L+G F + Y +R+ L+ KY+L+++PC +
Sbjct: 95 WALVNTICCFATNG------ALLGLPGCF----VSCYACGYRKSLRAKYNLQEAPCGDFV 144
Query: 180 VHCCLHWCANCQEHRERKGRLADNN--ANRNTIVNPPPMQEM 219
H H CA CQE+RE + + + + + I N P Q M
Sbjct: 145 THFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQTM 186
>AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162
Length = 161
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 62/150 (41%), Gaps = 38/150 (25%)
Query: 54 GQQLPESYEAPADEPWTTGICGCAEDTESCWTGSFFPCVLFGHNVEAL-REDIPWTTPCT 112
+QLP+ WTTG+C C ED C + PCV F NVE + R IP
Sbjct: 21 AEQLPQGL-------WTTGLCDCHEDAHICVQTAIMPCVSFAQNVEIVNRGTIP------ 67
Query: 113 CHAVCVEGGIALAILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKD 172
C+ G+ I + G + WL+A R +L+ + L +
Sbjct: 68 ----CMNAGL-----------------IHLALGFIGCSWLYAFPN---RSRLREHFALPE 103
Query: 173 SPCDPCLVHCCLHWCANCQEHRERKGRLAD 202
PC LVH CA CQE RE K R AD
Sbjct: 104 EPCRDFLVHLFCTPCAICQESRELKNRGAD 133
>AT1G49030.1 | chr1:18136794-18137846 FORWARD LENGTH=225
Length = 224
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 69 WTTGICGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIALAILT 128
WT+G+ C D E+ FP V FG E + E C G+ ++
Sbjct: 88 WTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGA---------TSCGTAGMLYGLIC 138
Query: 129 VIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLHWCA 188
+F + YT FR +L+ KY L D+P + HC +CA
Sbjct: 139 CLFA-------------------IPCVYTCTFRTKLRSKYGLPDAPAPDWITHCFCEYCA 179
Query: 189 NCQEHRERKGRLAD 202
CQE+RE K R D
Sbjct: 180 LCQEYRELKNRGLD 193
>AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191
Length = 190
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 25 APADEDIRPGELNLPAHFPQL-EQRRCCECGQQLPESYEA-----PADEPWTTGICGCAE 78
P++ED G LP P QR Q P +Y+ PW+TG+ C
Sbjct: 6 TPSEEDSNNG---LPVQQPGTPNQRTRVPVSQFAPPNYQQANVNLSVGRPWSTGLFDCQA 62
Query: 79 DTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIALAILTVIFPGIDPST 138
D + + PCV FG E + E G + + T ++
Sbjct: 63 DQANAVLTTIVPCVTFGQIAEVMDE----------------GEMTCPLGTFMY------- 99
Query: 139 SILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLHWCANCQEHRERKG 198
+L+ L W + + Y R++++RK++L ++P C H C+ CQE+RE K
Sbjct: 100 -LLMMPALCSHWVMGSKY----REKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKI 154
Query: 199 RLADNNANRNTIV 211
R D + N I+
Sbjct: 155 RNLDPSLGWNGIL 167
>AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134
Length = 133
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 32/158 (20%)
Query: 66 DEPWTTGICGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIALA 125
++ WT+G+ C ED+E+ F PCV FG + E C G+
Sbjct: 2 EKQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEG---------RTGCGRCGVFYG 52
Query: 126 ILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLH 185
++ + +G +FS +R +++ K+ L +SP C+ H
Sbjct: 53 LICCV-----------VGLPCLFSC--------TYRTKIRSKFGLPESPTSDCVTHFFCE 93
Query: 186 WCANCQEHRERKGRLADN----NANRNTIVNPPPMQEM 219
CA CQEHRE K R D + N + PP Q+M
Sbjct: 94 CCALCQEHRELKTRGLDPSIGWSGNMQRTMAPPMSQQM 131
>AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185
Length = 184
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 36/158 (22%)
Query: 69 WTTGICGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIALAILT 128
W++ + C D+E+ PCV G E + E TPC GG+
Sbjct: 54 WSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEG---ATPCA------TGGLLY---- 100
Query: 129 VIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLHWCA 188
G++F + Y+ +FR +++ KY L D+P + H CA
Sbjct: 101 ----------------GMIFFIGVPFVYSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCA 144
Query: 189 NCQEHRERKGRLADNNAN-------RNTIVNPPPMQEM 219
CQE+RE K R D N + +++PP Q M
Sbjct: 145 LCQEYRELKHRGFDPNIGWAGNVQAQQPVMSPPTGQRM 182
>AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153
Length = 152
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 28/138 (20%)
Query: 65 ADEPWTTGICGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIAL 124
A+ W+TG C C D ++C + PC+ FG E + +T C G A
Sbjct: 12 AEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRG---STSC---------GTAG 59
Query: 125 AILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCL 184
A+ +I +++ G ++S + +R +++ +Y++K C CL H C
Sbjct: 60 ALYALI--------AVVTGCACIYSCF--------YRGKMRAQYNIKGDDCTDCLKHFCC 103
Query: 185 HWCANCQEHRERKGRLAD 202
C+ Q++RE K R D
Sbjct: 104 ELCSLTQQYRELKHRGYD 121
>AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153
Length = 152
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 28/138 (20%)
Query: 65 ADEPWTTGICGCAEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIAL 124
A+ W+TG C C D ++C PC+ FG + + T C G A
Sbjct: 12 AEGEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRG---NTSC---------GTAG 59
Query: 125 AILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCL 184
A+ ++ + + G G + Y+ I+R +++ +Y+++ C CL H C
Sbjct: 60 ALYVLL--------AAITGCGCL--------YSCIYRGKIRAQYNIRGDGCTDCLKHFCC 103
Query: 185 HWCANCQEHRERKGRLAD 202
CA QE+RE K R D
Sbjct: 104 ELCALTQEYRELKHRGFD 121
>AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185
Length = 184
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 50/204 (24%)
Query: 25 APADEDIRPGELNLPAHFPQLEQRRCCECGQQLPESYEAPADEPWTTGICGCAEDTESCW 84
+P+++ G + PA+ P +P +Y+ ++ W++ + C D+E+
Sbjct: 20 SPSNKVSHNGGIGKPANIPT-----------GIPVNYQQTQNQ-WSSQLFDCMNDSENAV 67
Query: 85 TGSFFPCVLFGHNVEALREDIPWTTPCTCHAVCVEGGIALAILTVIFPGIDPSTSILIGE 144
PCV FG E + E TPC +T+ L+
Sbjct: 68 ITLIAPCVTFGQIAEIVDEG---ATPC-------------------------ATAGLLYG 99
Query: 145 GLVFSWWLFATYTGIFRQQLQRKYHLKDSPCDPCLVHCCLHWCANCQEHRERKGRLAD-- 202
L F+ F Y+ +FR ++++K+ L D+P + H A CQE+RE K D
Sbjct: 100 ALFFTGASF-VYSYMFRARIRKKFGLPDAPAPDWITHLVCMPFALCQEYRELKHHGFDPI 158
Query: 203 -------NNANRNTIVNPPPMQEM 219
A + ++ PP Q M
Sbjct: 159 LGWAGNVQQAQQQEMMTPPTGQRM 182
>AT1G58320.1 | chr1:21634123-21635303 REVERSE LENGTH=149
Length = 148
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 55 QQLPESYEAPADEPWTTGICGC-AEDTESCWTGSFFPCVLFGHNVEALREDIPWTTPCTC 113
+Q ++ + + WTTG+ C +ED +C PCV FG E L +
Sbjct: 3 EQEGKNEKKVTEGQWTTGLYDCLSEDISTCCFTWVCPCVAFGRIAEILDKG--------- 53
Query: 114 HAVCVEGGIALAILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQQLQRKYHLKDS 173
E LA L V+ +SI G W +A+ +R +L+ +Y L ++
Sbjct: 54 -----ETSRGLAGLMVV-----AMSSIGCG-------WYYASK---YRAKLRHQYALPEA 93
Query: 174 PCDPCLVHCCLHWCANCQEHRERKGRLAD-----NNANRNTIVNPPPM 216
PC +HC CA QEHRE K R D N N N PP
Sbjct: 94 PCADGAIHCFCCPCALTQEHRELKHRGLDPSLGWNIENGGLNSNTPPF 141
>AT2G37110.1 | chr2:15592689-15593726 FORWARD LENGTH=243
Length = 242
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 51/198 (25%)
Query: 57 LPESYEAPADEP-----WTTGICGC--------AEDTESCWTGSFFPCVLFGHNVEALRE 103
LP S+ + EP W +G+ C + D E C GS PCVL+G N E L
Sbjct: 58 LPVSHGSVIGEPIRRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCVLYGTNAERL-- 115
Query: 104 DIPWTTPCTCHAVCVEGGIALAILTVIFPGIDPSTSILIGEGLVFSWWLFATYTGIFRQ- 162
+ P T C L L + F G + L G + W+ +++ + I R+
Sbjct: 116 ---GSAPGTFSNHC------LTYLGLYFVG-----NSLFGWNCLAPWFSYSSRSAIRRKF 161
Query: 163 QLQRKYHLKDSPCDPC-------------------LVHCCLHWCANCQEHRERKGRLA-- 201
L+ + + C C + H H CA CQE RE + ++
Sbjct: 162 NLEGSFEAMNRSCGCCGGCIEDEMQREHLETTCDFVTHVLCHTCALCQEGRELRRKVLHP 221
Query: 202 DNNANRNTIVNPPPMQEM 219
NA +V PP Q M
Sbjct: 222 GFNAQSTVVVMPPIEQTM 239
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,866,106
Number of extensions: 262061
Number of successful extensions: 572
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 563
Number of HSP's successfully gapped: 15
Length of query: 235
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 140
Effective length of database: 8,502,049
Effective search space: 1190286860
Effective search space used: 1190286860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)