Os10g0546300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0546300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.41 | 0.25 | 8.99 | -0.467 | 0.418 | 0.407 | -0.386 | 0.422 | -0.0914 | 5.4 | 69 | 4761 | -- | -- |
| 28.67 | 0.249 | 8.99 | -0.48 | 0.425 | 0.438 | -0.426 | -- | -0.0948 | 5.37 | 68.87 | 4761 | -- | -- |
| 28.76 | 0.25 | 8.99 | -0.466 | 0.416 | 0.399 | -- | 0.493 | -0.0904 | 5.5 | 69 | 4796 | -- | -- |
| 29.13 | 0.251 | 8.99 | -0.482 | 0.422 | 0.429 | -- | -- | -0.0929 | 5.47 | 68.75 | 4791 | -- | -- |
| 35.61 | 0.278 | 9 | -0.437 | -- | 0.449 | -- | 0.515 | -0.0874 | -- | 69 | 5609 | -- | -- |
| 31.83 | 0.265 | 8.99 | -0.487 | 0.377 | -- | -0.388 | -- | -0.0776 | 5.37 | -- | -- | -- | -- |
| 32.21 | 0.266 | 8.99 | -0.487 | 0.375 | -- | -- | -- | -0.0758 | 5.42 | -- | -- | -- | -- |
| 35.98 | 0.279 | 9 | -0.455 | -- | 0.471 | -- | -- | -0.0893 | -- | 68 | 5616 | -- | -- |
| 31.56 | 0.262 | 8.96 | -- | 0.374 | 0.501 | -- | -- | 0.053 | 5.39 | 57.86 | 47520 | -- | -- |
| 39.52 | 0.294 | 8.99 | -0.475 | -- | -- | -- | -- | -0.0666 | -- | -- | -- | -- | -- |
| 38.47 | 0.29 | 8.98 | -- | 0.367 | -- | -- | -- | -0.0215 | 5.48 | -- | -- | -- | -- |
| 38.84 | 0.29 | 8.96 | -- | -- | 0.49 | -- | -- | 0.0593 | -- | 57.42 | 47520 | -- | -- |
| 45.47 | 0.315 | 8.98 | -- | -- | -- | -- | -- | -0.0139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.98 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 5 | 27.36 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 8 | 27.46 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 16 | 27.69 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 28 | 27.90 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 22 | 14 |
| 36 | 27.95 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 2 | 10 |
| 56 | 28.01 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 66 | 28.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 73 | 28.05 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 21 |
| 74 | 28.06 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 75 | 28.06 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 92 | 28.06 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 22 |
| 97 | 28.07 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 98 | 28.07 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 113 | 28.07 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 21 |
| 116 | 28.07 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 135 | 28.08 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 13 |
| 175 | 28.09 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 279 | 28.11 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 312 | 28.12 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 317 | 28.12 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 319 | 28.12 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 323 | 28.13 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 2 | 10 |
| 340 | 28.14 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 5 | 7 |
| 348 | 28.15 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 355 | 28.16 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 372 | 28.17 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 383 | 28.18 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 7 |
| 398 | 28.19 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 399 | 28.19 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 410 | 28.20 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 424 | 28.21 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 434 | 28.21 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 442 | 28.21 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 7 |
| 453 | 28.22 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 474 | 28.23 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 16 |
| 488 | 28.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 491 | 28.24 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 498 | 28.25 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 499 | 28.25 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 520 | 28.26 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 524 | 28.26 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 526 | 28.26 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 528 | 28.26 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 540 | 28.27 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 555 | 28.28 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 559 | 28.28 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 645 | 28.32 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 662 | 28.33 | humidity | 70.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 666 | 28.33 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 670 | 28.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 704 | 28.34 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 715 | 28.35 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 745 | 28.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 746 | 28.36 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 749 | 28.36 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 766 | 28.37 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 768 | 28.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 791 | 28.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 792 | 28.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 803 | 28.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 823 | 28.39 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 831 | 28.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 840 | 28.40 | humidity | 60.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 841 | 28.40 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 858 | 28.41 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 865 | 28.41 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 885 | 28.42 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 909 | 28.43 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 926 | 28.44 | humidity | 70.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 942 | 28.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 944 | 28.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 952 | 28.45 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 984 | 28.46 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 5 | NA |