Os10g0545700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25).
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Os10g0545700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.11 | 0.176 | 12.8 | -0.512 | 0.754 | -0.44 | 0.394 | 0.756 | -0.255 | 6.5 | 49.97 | 4268 | -- | -- |
| 14.28 | 0.176 | 12.8 | -0.603 | 0.75 | -0.202 | 0.419 | -- | -0.249 | 6.51 | 52.52 | 2728 | -- | -- |
| 14.49 | 0.177 | 12.8 | -0.506 | 0.754 | -0.438 | -- | 0.754 | -0.256 | 6.52 | 49.94 | 4268 | -- | -- |
| 14.65 | 0.178 | 12.8 | -0.589 | 0.754 | -0.236 | -- | -- | -0.244 | 6.5 | 51.06 | 2727 | -- | -- |
| 43.88 | 0.309 | 12.8 | -0.524 | -- | -0.374 | -- | 0.493 | -0.235 | -- | 50.97 | 3484 | -- | -- |
| 15.16 | 0.183 | 12.8 | -0.653 | 0.751 | -- | 0.372 | -- | -0.223 | 6.61 | -- | -- | -- | -- |
| 15.5 | 0.184 | 12.8 | -0.648 | 0.752 | -- | -- | -- | -0.224 | 6.64 | -- | -- | -- | -- |
| 22.68 | 0.222 | 12.9 | -0.501 | -- | -0.737 | -- | -- | -0.19 | -- | 73 | 564 | -- | -- |
| 22.71 | 0.222 | 12.9 | -- | 0.76 | -0.311 | -- | -- | -0.241 | 6.76 | 51 | 4368 | -- | -- |
| 44.98 | 0.313 | 12.9 | -0.63 | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
| 26.56 | 0.241 | 12.8 | -- | 0.744 | -- | -- | -- | -0.152 | 6.69 | -- | -- | -- | -- |
| 30.6 | 0.258 | 12.8 | -- | -- | -0.749 | -- | -- | -0.113 | -- | 74 | 571 | -- | -- |
| 55.45 | 0.348 | 12.8 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 13.20 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 3 |
| 4 | 13.27 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 10 |
| 7 | 13.29 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 12 |
| 8 | 13.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 19 | 13.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 7 |
| 21 | 13.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 24 | 13.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 25 | 13.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 13 |
| 27 | 13.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 8 |
| 32 | 13.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 6 |
| 40 | 13.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 44 | 13.41 | temperature | 15 | 30 | > th | dose dependent | rect. | 20 | 12 |
| 45 | 13.42 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |
| 61 | 13.45 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 67 | 13.46 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 12 |
| 80 | 13.49 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 9 |
| 112 | 13.53 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 7 |
| 124 | 13.54 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 134 | 13.55 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 5 |
| 137 | 13.55 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 12 |
| 143 | 13.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 214 | 13.62 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 228 | 13.63 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 234 | 13.63 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 20 |
| 252 | 13.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 6 |
| 260 | 13.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 284 | 13.66 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 12 |
| 314 | 13.68 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 338 | 13.69 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 7 |
| 380 | 13.71 | radiation | 20 | 270 | > th | dose independent | rect. | 14 | 20 |
| 381 | 13.71 | temperature | 30 | 90 | < th | dose independent | rect. | 19 | 21 |
| 396 | 13.72 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 19 | 8 |
| 399 | 13.72 | radiation | 40 | 90 | < th | dose independent | rect. | 19 | 21 |
| 418 | 13.73 | radiation | 20 | 270 | > th | dose independent | sin | 12 | NA |
| 426 | 13.73 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 467 | 13.74 | radiation | 40 | 270 | < th | dose dependent | rect. | 18 | 22 |
| 468 | 13.75 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 473 | 13.75 | temperature | 10 | 270 | > th | dose dependent | sin | 0 | NA |
| 545 | 13.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 16 |
| 577 | 13.79 | radiation | 20 | 270 | < th | dose independent | sin | 12 | NA |
| 616 | 13.80 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 19 |
| 636 | 13.81 | radiation | 10 | 270 | > th | dose dependent | sin | 12 | NA |
| 695 | 13.82 | radiation | 10 | 270 | > th | dose dependent | rect. | 14 | 20 |
| 911 | 13.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 949 | 13.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 952 | 13.90 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 989 | 13.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 7 |