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Os10g0532600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF623, plant domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.73 (0.0557) R2 : 0.507
β1 : -1.4 (0.207) R2dD : 0.0551 R2D : 0.00621
β2 : 2.57 (0.139) R2dC : 0.372 R2C : 0.335
β3 : 1.82 (0.192) R2dE : 0.108 R2E : 0.032
β4 : 4.24 (0.583) R2dD*C : 0.0583 R2D*C : 0.0408
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0544 (0.121) R2dN8 : 0.000416 R2N8 : -0.00346
σ : 1.03
deviance : 490.73
__
_____
C
peak time of C : 8.42
E
wheather : temperature
threshold : 30.76
memory length : 1841
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
476.2 1.03 6.91 -2.89 2.56 2.4 4.13 -8 -0.0337 8.65 29.32 1231 -- --
490.73 1.03 6.73 -1.4 2.57 1.82 4.24 -- 0.0544 8.42 30.76 1841 -- --
530.73 1.07 6.97 -3.17 2.54 2.5 -- -9.13 -0.235 8.62 28.54 1254 -- --
535.99 1.08 6.74 -1.26 2.54 1.48 -- -- 0.0659 8.61 30.4 1214 -- --
887.11 1.39 7.03 -3.12 -- 2.31 -- -8.84 -0.174 -- 28.8 1393 -- --
586.45 1.14 6.79 -1.02 2.47 -- 4.1 -- -0.208 8.32 -- -- -- --
638.95 1.18 6.79 -0.9 2.46 -- -- -- -0.21 8.3 -- -- -- --
879.75 1.38 6.81 -1.29 -- 1.34 -- -- 0.00159 -- 30.2 5761 -- --
577.27 1.12 6.7 -- 2.53 1.31 -- -- 0.171 8.64 30.5 1187 -- --
974.82 1.46 6.86 -0.883 -- -- -- -- -0.183 -- -- -- -- --
660.28 1.2 6.77 -- 2.46 -- -- -- -0.11 8.32 -- -- -- --
921.68 1.41 6.79 -- -- 1.2 -- -- 0.155 -- 30.41 5745 -- --
995.41 1.47 6.83 -- -- -- -- -- -0.0855 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 478.13 wind 5 43200 > th dose independent rect. 11 3
2 478.87 temperature 30 1440 > th dose dependent rect. 15 1
3 479.16 wind 5 43200 < th dose independent rect. 11 3
4 479.43 temperature 30 1440 > th dose dependent rect. 14 4
40 480.69 temperature 30 1440 > th dose dependent sin 14 NA
61 481.32 radiation 10 1440 > th dose independent rect. 11 20
135 483.48 temperature 30 720 < th dose independent rect. 16 18
136 483.52 temperature 30 720 < th dose independent rect. 16 16
137 483.68 temperature 30 720 > th dose independent rect. 17 16
155 483.78 wind 5 43200 > th dose dependent rect. 12 2
158 483.88 wind 5 43200 > th dose independent rect. 8 7
159 483.93 temperature 30 1440 > th dose dependent no NA NA
251 483.95 temperature 30 720 > th dose independent sin 11 NA
269 484.23 humidity 50 4320 > th dose independent rect. 13 4
271 484.30 temperature 30 720 < th dose independent sin 11 NA
272 484.35 temperature 30 720 < th dose independent rect. 16 9
279 484.76 temperature 30 1440 > th dose dependent rect. 17 23
288 484.92 wind 5 43200 < th dose independent rect. 8 7
321 485.49 temperature 30 720 > th dose independent rect. 17 2
343 485.60 radiation 10 1440 > th dose independent rect. 11 7
355 485.64 temperature 30 1440 > th dose independent rect. 15 4
415 486.27 temperature 30 1440 < th dose independent rect. 15 14
425 486.38 humidity 80 720 < th dose dependent rect. 17 3
460 486.47 temperature 30 1440 < th dose independent rect. 15 7
465 486.54 radiation 10 1440 < th dose dependent rect. 11 7
468 486.60 temperature 30 1440 < th dose independent rect. 15 4
482 486.82 radiation 10 1440 < th dose dependent rect. 11 19
483 486.84 wind 5 43200 > th dose independent rect. 3 13
487 486.94 radiation 10 1440 > th dose independent sin 15 NA
502 487.20 radiation 10 1440 < th dose dependent rect. 11 17
509 487.38 temperature 25 1440 > th dose dependent rect. 6 1
511 487.39 humidity 70 720 < th dose independent rect. 16 4
522 487.39 radiation 10 1440 < th dose dependent rect. 11 14
536 487.40 wind 5 43200 > th dose independent rect. 24 16
540 487.42 radiation 10 1440 < th dose dependent rect. 11 11
548 487.48 radiation 1 1440 < th dose independent rect. 11 19
557 487.61 wind 5 43200 < th dose independent rect. 3 13
563 487.77 wind 5 43200 < th dose independent rect. 24 16
574 488.05 humidity 60 1440 < th dose dependent rect. 16 1
589 488.21 temperature 30 1440 < th dose independent rect. 15 20
610 488.45 humidity 70 720 < th dose independent rect. 17 2
638 488.61 temperature 30 1440 < th dose independent rect. 9 20
641 488.62 temperature 30 1440 < th dose independent rect. 9 22
650 488.68 wind 5 43200 > th dose independent sin 2 NA
652 488.69 temperature 30 1440 < th dose independent rect. 9 13
657 488.73 radiation 30 14400 > th dose independent rect. 16 1
672 488.73 temperature 30 1440 < th dose independent rect. 14 23
677 488.75 temperature 30 1440 < th dose independent rect. 9 10
686 488.80 radiation 30 1440 > th dose independent rect. 16 16
687 488.80 radiation 10 1440 < th dose dependent sin 16 NA
751 489.23 wind 5 43200 > th dose independent rect. 20 21
850 489.80 temperature 30 1440 < th dose independent rect. 12 23
861 489.88 wind 5 43200 < th dose independent sin 2 NA
871 489.91 temperature 30 1440 < th dose independent rect. 2 20
887 489.96 temperature 30 1440 < th dose independent rect. 6 23
891 489.97 temperature 30 1440 < th dose independent rect. 2 17
902 489.98 temperature 30 1440 < th dose independent rect. 21 22
905 489.99 temperature 30 1440 < th dose independent no NA NA
924 490.03 temperature 30 1440 < th dose independent rect. 6 16
963 490.09 temperature 30 1440 < th dose independent rect. 6 13
988 490.15 wind 5 43200 < th dose independent rect. 20 21