Os10g0527100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV).
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Os10g0527100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.12 | 0.352 | 15.2 | 0.0989 | 0.841 | 0.893 | 0.211 | -0.655 | -0.0598 | 24 | 24.1 | 1603 | -- | -- |
| 56.11 | 0.349 | 15.3 | -0.0534 | 0.86 | 0.874 | 0.214 | -- | -0.0763 | 0.0105 | 23.1 | 3171 | -- | -- |
| 56.29 | 0.349 | 15.2 | 0.0923 | 0.841 | 0.894 | -- | -0.657 | -0.0614 | 23.9 | 24.11 | 1622 | -- | -- |
| 56.24 | 0.349 | 15.2 | -0.0694 | 0.862 | 0.891 | -- | -- | -0.0699 | 0.00525 | 23.1 | 3160 | -- | -- |
| 91.77 | 0.449 | 15.2 | -0.211 | -- | 0.656 | -- | -0.141 | -0.0779 | -- | 24.3 | 1601 | -- | -- |
| 85.2 | 0.433 | 15.3 | -0.476 | 0.824 | -- | 0.222 | -- | -0.455 | 24 | -- | -- | -- | -- |
| 85.41 | 0.433 | 15.3 | -0.485 | 0.823 | -- | -- | -- | -0.456 | 24 | -- | -- | -- | -- |
| 91.88 | 0.448 | 15.2 | -0.253 | -- | 0.65 | -- | -- | -0.0932 | -- | 24.3 | 1601 | -- | -- |
| 56.35 | 0.35 | 15.2 | -- | 0.864 | 0.908 | -- | -- | -0.0558 | 0.00644 | 23 | 3160 | -- | -- |
| 128.03 | 0.529 | 15.3 | -0.459 | -- | -- | -- | -- | -0.444 | -- | -- | -- | -- | -- |
| 91.6 | 0.448 | 15.3 | -- | 0.817 | -- | -- | -- | -0.402 | 23.9 | -- | -- | -- | -- |
| 93.51 | 0.452 | 15.2 | -- | -- | 0.674 | -- | -- | -0.0531 | -- | 24.3 | 1601 | -- | -- |
| 133.6 | 0.54 | 15.3 | -- | -- | -- | -- | -- | -0.394 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.48 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 2 | 51.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 6 | 51.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 9 | 52.06 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 31 | 52.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 39 | 52.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 138 | 53.85 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 377 | 55.57 | temperature | 20 | 10 | > th | dose dependent | sin | 4 | NA |
| 399 | 55.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 452 | 55.88 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 510 | 56.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 585 | 56.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 667 | 56.52 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 765 | 56.76 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 776 | 56.78 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 17 |
| 789 | 56.80 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 903 | 56.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 920 | 57.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 962 | 57.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |