BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0527100 Os10g0527100|AK121120
         (247 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATCG00150.1  | chrC:14021-14770 REVERSE LENGTH=250                399   e-112

>ATCG00150.1 | chrC:14021-14770 REVERSE LENGTH=250
          Length = 249

 Score =  399 bits (1025), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/249 (79%), Positives = 210/249 (84%), Gaps = 2/249 (0%)

Query: 1   MNIIPCSIKTL--KGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVIIAV 58
           MN++ CSI TL  +GLY+ISGVEVGQHFYWQIGGFQ+HAQVLITSWVVI ILLGS ++A+
Sbjct: 1   MNVLSCSINTLIKEGLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVLAI 60

Query: 59  RNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWK 118
           RNPQTIPTDGQNFFE+VLEFIRD+SKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWK
Sbjct: 61  RNPQTIPTDGQNFFEFVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWK 120

Query: 119 IIQLPHGELAAPTNDINXXXXXXXXXXXXYFYAGLSKKGLSYFEKYIKPTPILLPINILE 178
           IIQLP GELAAPTNDIN            YFYAGLSKKGL YF KYI+PTPILLPINILE
Sbjct: 121 IIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILE 180

Query: 179 DFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 238
           DFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct: 181 DFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240

Query: 239 IGESMEGHH 247
           IGESMEGHH
Sbjct: 241 IGESMEGHH 249



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.144    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,687,583
Number of extensions: 171248
Number of successful extensions: 454
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 452
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 151
Effective length of database: 8,474,633
Effective search space: 1279669583
Effective search space used: 1279669583
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)