Os10g0504200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome b561 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0504200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome b561 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.44 | 0.539 | 7.95 | -1.87 | 1.08 | 0.997 | -0.0647 | -1.95 | 0.000946 | 23.4 | 19.6 | 2648 | -- | -- |
| 136.8 | 0.545 | 7.89 | -1.59 | 1.1 | 1.46 | -0.000318 | -- | 0.0781 | 23.3 | 19.2 | 2723 | -- | -- |
| 131.45 | 0.534 | 7.95 | -1.87 | 1.08 | 0.998 | -- | -1.95 | 0.000639 | 23.4 | 19.6 | 2648 | -- | -- |
| 133.51 | 0.538 | 7.87 | -1.63 | 1.1 | 1.72 | -- | -- | 0.0949 | 23.2 | 18.39 | 2770 | -- | -- |
| 201.26 | 0.661 | 7.92 | -1.86 | -- | 1.23 | -- | -1.69 | -0.00558 | -- | 19.7 | 2414 | -- | -- |
| 172.11 | 0.615 | 7.81 | -0.889 | 1.13 | -- | -0.226 | -- | 0.377 | 23.6 | -- | -- | -- | -- |
| 172.33 | 0.615 | 7.81 | -0.88 | 1.13 | -- | -- | -- | 0.378 | 23.5 | -- | -- | -- | -- |
| 202.41 | 0.663 | 7.88 | -1.57 | -- | 1.78 | -- | -- | 0.0691 | -- | 18.4 | 2387 | -- | -- |
| 183.38 | 0.631 | 7.8 | -- | 1.08 | 1.11 | -- | -- | 0.423 | 23.2 | 17.9 | 1312 | -- | -- |
| 252.94 | 0.743 | 7.79 | -0.849 | -- | -- | -- | -- | 0.391 | -- | -- | -- | -- | -- |
| 192.72 | 0.649 | 7.79 | -- | 1.12 | -- | -- | -- | 0.476 | 23.5 | -- | -- | -- | -- |
| 252.01 | 0.739 | 7.79 | -- | -- | 1.35 | -- | -- | 0.397 | -- | 17.8 | 746 | -- | -- |
| 271.94 | 0.77 | 7.77 | -- | -- | -- | -- | -- | 0.485 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.52 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 2 | 127.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 4 |
| 3 | 127.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 9 | 128.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 11 | 128.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 31 | 128.97 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 37 | 129.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 48 | 129.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 119 | 130.53 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 122 | 130.58 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 149 | 130.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 188 | 131.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 206 | 131.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 214 | 131.85 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 216 | 131.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 340 | 133.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 423 | 134.72 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 426 | 134.79 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 440 | 134.89 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 445 | 134.94 | humidity | 60 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 473 | 135.17 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 495 | 135.33 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 509 | 135.49 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 579 | 135.95 | humidity | 60 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 602 | 136.13 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 617 | 136.24 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 625 | 136.30 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 3 |
| 677 | 136.59 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 691 | 136.64 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 693 | 136.65 | radiation | 30 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 704 | 136.68 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 788 | 137.03 | radiation | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 870 | 137.34 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 897 | 137.45 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 938 | 137.63 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 964 | 137.70 | wind | 1 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 974 | 137.74 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 977 | 137.77 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 984 | 137.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |