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Os10g0497000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0114) R2 : 0.292
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.329 (0.024) R2dN8 : 0.377 R2N8 : 0.292
σ : 0.215
deviance : 21.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.92 0.162 11.6 0.352 0.0363 -0.447 -0.192 0.0307 0.381 8.32 1.141 69 -- --
11.92 0.161 11.6 0.352 0.0355 -0.446 -0.187 -- 0.382 8.1 1.169 68 -- --
11.99 0.161 11.6 0.344 0.0448 -0.47 -- -0.0845 0.382 10.2 1.103 68 -- --
12.01 0.161 11.6 0.348 0.0485 -0.472 -- -- 0.383 10.2 0.8368 68 -- --
12.07 0.162 11.6 0.349 -- -0.432 -- -0.0818 0.382 -- 1.939 68 -- --
14.67 0.18 11.6 0.35 0.225 -- 0.0392 -- 0.365 1.01 -- -- -- --
14.67 0.179 11.6 0.348 0.225 -- -- -- 0.365 1.04 -- -- -- --
12.08 0.162 11.6 0.348 -- -0.43 -- -- 0.381 -- 1.843 68 -- --
15.2 0.182 11.6 -- 0.046 -0.471 -- -- 0.344 9.51 1.08 67 -- --
17.82 0.197 11.6 0.357 -- -- -- -- 0.369 -- -- -- -- --
17.87 0.198 11.6 -- 0.231 -- -- -- 0.326 1.1 -- -- -- --
15.27 0.182 11.6 -- -- -0.436 -- -- 0.343 -- 1.918 68 -- --
21.17 0.215 11.6 -- -- -- -- -- 0.329 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.00 radiation 30.0 90 < th dose dependent rect. 4 15
8 11.16 radiation 20.0 90 < th dose independent rect. 3 16
9 11.16 radiation 10.0 270 < th dose dependent rect. 2 16
41 11.37 radiation 20.0 90 < th dose dependent sin 1 NA
51 11.41 radiation 10.0 270 < th dose dependent sin 3 NA
54 11.42 radiation 10.0 270 < th dose independent rect. 1 17
55 11.42 radiation 40.0 90 < th dose dependent rect. 13 20
63 11.44 radiation 40.0 90 < th dose dependent rect. 15 18
68 11.47 radiation 30.0 270 < th dose dependent rect. 1 7
72 11.48 radiation 1.0 270 < th dose independent rect. 3 15
83 11.49 radiation 40.0 90 < th dose dependent rect. 13 22
94 11.53 radiation 20.0 270 < th dose independent rect. 1 7
102 11.53 radiation 40.0 90 < th dose dependent rect. 11 22
104 11.54 radiation 40.0 270 < th dose independent rect. 13 17
125 11.57 humidity 50.0 270 > th dose dependent rect. 1 7
128 11.57 humidity 70.0 90 > th dose dependent rect. 3 17
157 11.62 humidity 80.0 270 > th dose independent rect. 1 7
167 11.63 precipitation 0.1 270 < th dose independent rect. 7 18
168 11.63 radiation 20.0 90 < th dose independent rect. 11 22
176 11.63 precipitation 0.1 270 < th dose dependent rect. 7 18
190 11.66 wind 9.0 270 < th dose independent rect. 6 8
191 11.66 precipitation 0.1 270 < th dose independent rect. 6 8
193 11.66 radiation 40.0 90 < th dose dependent rect. 3 8
194 11.66 precipitation 0.1 270 < th dose dependent rect. 6 8
200 11.67 radiation 1.0 270 > th dose independent rect. 6 8
211 11.68 temperature 10.0 270 > th dose independent rect. 6 8
212 11.68 atmosphere 995.0 270 > th dose independent rect. 6 8
213 11.68 atmosphere 1015.0 270 < th dose independent rect. 6 8
215 11.68 temperature 10.0 270 > th dose independent rect. 14 16
220 11.68 radiation 20.0 90 < th dose independent rect. 13 20
228 11.69 precipitation 0.1 270 < th dose independent rect. 18 8
236 11.69 precipitation 0.1 270 < th dose dependent rect. 18 8
265 11.72 radiation 1.0 270 > th dose independent sin 2 NA
267 11.72 atmosphere 995.0 270 > th dose independent rect. 14 16
271 11.72 wind 9.0 270 < th dose independent rect. 7 18
282 11.73 radiation 20.0 90 < th dose independent rect. 3 8
284 11.73 wind 9.0 270 < th dose independent rect. 14 16
287 11.73 radiation 20.0 90 < th dose independent rect. 15 18
288 11.73 radiation 40.0 1440 < th dose dependent rect. 21 8
298 11.74 wind 7.0 270 < th dose independent rect. 18 8
306 11.74 temperature 10.0 270 > th dose dependent rect. 1 7
327 11.76 wind 9.0 270 < th dose independent rect. 1 6
328 11.76 temperature 10.0 270 > th dose independent rect. 1 6
330 11.76 temperature 30.0 270 < th dose independent rect. 1 6
331 11.76 humidity 50.0 270 > th dose independent rect. 1 6
333 11.76 atmosphere 995.0 270 > th dose independent rect. 1 6
334 11.76 atmosphere 1015.0 270 < th dose independent rect. 1 6
337 11.76 humidity 50.0 270 > th dose independent rect. 6 8
343 11.76 temperature 10.0 270 > th dose independent rect. 7 18
344 11.76 radiation 40.0 270 < th dose independent rect. 11 20
360 11.77 precipitation 0.1 270 < th dose independent rect. 6 20
362 11.77 radiation 1.0 270 > th dose independent rect. 17 22
375 11.77 precipitation 0.1 270 < th dose dependent rect. 6 20
383 11.78 humidity 50.0 90 > th dose dependent rect. 3 6
391 11.79 radiation 1.0 270 < th dose independent rect. 3 3
394 11.79 radiation 10.0 90 > th dose independent rect. 8 8
396 11.79 wind 1.0 270 > th dose independent rect. 8 17
409 11.80 radiation 1.0 270 < th dose independent sin 2 NA
419 11.80 wind 5.0 30 < th dose independent rect. 20 8
455 11.82 radiation 10.0 270 < th dose independent rect. 18 8
475 11.83 humidity 80.0 30 > th dose independent rect. 4 16
486 11.83 radiation 10.0 270 < th dose dependent rect. 18 8
509 11.84 radiation 1.0 90 > th dose dependent sin 2 NA
514 11.84 radiation 1.0 90 > th dose dependent rect. 7 9
521 11.85 temperature 10.0 270 > th dose independent rect. 19 7
522 11.85 temperature 30.0 270 < th dose independent rect. 19 7
523 11.85 humidity 50.0 270 > th dose independent rect. 19 7
524 11.85 atmosphere 995.0 270 > th dose independent rect. 19 7
537 11.85 temperature 10.0 270 > th dose independent rect. 2 16
538 11.85 atmosphere 1015.0 270 < th dose independent rect. 2 16
563 11.86 precipitation 0.1 270 < th dose independent rect. 1 6
572 11.86 humidity 60.0 270 > th dose dependent rect. 3 3
574 11.86 precipitation 0.1 270 < th dose dependent rect. 1 6
586 11.87 wind 1.0 270 > th dose independent rect. 19 7
588 11.87 wind 1.0 270 > th dose independent rect. 6 8
594 11.87 wind 9.0 270 < th dose independent rect. 6 20
602 11.87 humidity 60.0 90 > th dose dependent rect. 3 8
608 11.88 humidity 80.0 270 > th dose independent rect. 3 3
617 11.88 atmosphere 995.0 270 > th dose independent rect. 2 16
642 11.89 atmosphere 1010.0 270 < th dose independent rect. 2 4
708 11.91 wind 9.0 270 < th dose independent rect. 2 4
709 11.91 temperature 10.0 270 > th dose independent rect. 2 4
711 11.91 temperature 30.0 270 < th dose independent rect. 2 4
712 11.91 humidity 50.0 270 > th dose independent rect. 2 4
715 11.91 atmosphere 995.0 270 > th dose independent rect. 2 4
725 11.91 temperature 10.0 270 > th dose independent rect. 6 20
741 11.91 humidity 70.0 270 > th dose dependent rect. 1 18
753 11.92 atmosphere 1010.0 90 < th dose independent rect. 3 6
761 11.92 wind 9.0 270 < th dose independent rect. 2 16
855 11.95 temperature 20.0 270 > th dose independent rect. 14 17
858 11.95 wind 1.0 270 > th dose independent rect. 6 20
931 11.97 temperature 10.0 1440 > th dose independent rect. 21 8
934 11.97 temperature 30.0 1440 < th dose independent rect. 21 8
938 11.97 humidity 50.0 1440 > th dose independent rect. 21 8
944 11.97 atmosphere 995.0 1440 > th dose independent rect. 21 8
946 11.97 radiation 20.0 1440 < th dose independent rect. 21 8
968 11.97 temperature 10.0 1440 > th dose independent rect. 5 16