Os10g0495900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1218 family protein.
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Os10g0495900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1218 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.5 | 0.392 | 8.85 | 1.17 | 1.06 | -0.97 | 0.759 | -0.308 | 0.467 | 0.0878 | 79.45 | 1233 | -- | -- |
| 69.6 | 0.389 | 8.85 | 1.19 | 1.07 | -0.992 | 0.717 | -- | 0.47 | 0.0728 | 79.48 | 1222 | -- | -- |
| 71.81 | 0.395 | 8.85 | 1.16 | 1.08 | -0.993 | -- | 0.0613 | 0.468 | 0.0879 | 79.59 | 1195 | -- | -- |
| 71.82 | 0.395 | 8.85 | 1.16 | 1.09 | -0.991 | -- | -- | 0.473 | 0.0828 | 80.44 | 1191 | -- | -- |
| 104.08 | 0.478 | 8.82 | 0.997 | -- | -1.19 | -- | -0.667 | 0.527 | -- | 133.1 | 23 | -- | -- |
| 91.69 | 0.449 | 8.84 | 1.02 | 0.894 | -- | 0.56 | -- | 0.511 | 23.9 | -- | -- | -- | -- |
| 93.04 | 0.452 | 8.84 | 0.993 | 0.891 | -- | -- | -- | 0.508 | 24 | -- | -- | -- | -- |
| 104.85 | 0.479 | 8.82 | 1.01 | -- | -1.22 | -- | -- | 0.528 | -- | 133.1 | 23 | -- | -- |
| 103.3 | 0.473 | 8.86 | -- | 1.21 | -1.07 | -- | -- | 0.417 | 23.8 | 103.5 | 1016 | -- | -- |
| 143.07 | 0.559 | 8.82 | 1.02 | -- | -- | -- | -- | 0.52 | -- | -- | -- | -- | -- |
| 119.05 | 0.51 | 8.86 | -- | 0.904 | -- | -- | -- | 0.398 | 0.0174 | -- | -- | -- | -- |
| 131.49 | 0.536 | 8.84 | -- | -- | -1.23 | -- | -- | 0.416 | -- | 133.1 | 23 | -- | -- |
| 170.55 | 0.61 | 8.84 | -- | -- | -- | -- | -- | 0.407 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.93 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 6 | 70.13 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 18 | 70.21 | humidity | 80 | 1440 | < th | dose dependent | sin | 20 | NA |
| 48 | 70.38 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 51 | 70.39 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 54 | 70.40 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 147 | 70.58 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 154 | 70.59 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 192 | 70.64 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 229 | 70.80 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 232 | 70.81 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 257 | 70.89 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 277 | 70.98 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 379 | 71.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 395 | 71.41 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 422 | 71.48 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 425 | 71.48 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 431 | 71.49 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 452 | 71.56 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 466 | 71.59 | humidity | 70 | 1440 | < th | dose independent | sin | 17 | NA |
| 484 | 71.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 499 | 71.65 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 746 | 72.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 752 | 72.02 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 881 | 72.20 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 5 |
| 886 | 72.21 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 941 | 72.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 987 | 72.31 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 7 |