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Os10g0495500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function UPF0120 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.32 (0.0249) R2 : 0.433
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.17 (0.0632) R2dC : 0.425 R2C : 0.426
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.114 (0.0525) R2dN8 : 0.00758 R2N8 : 0.00831
σ : 0.47
deviance : 101.1
__
_____
C
peak time of C : 15.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
84.88 0.433 9.33 0.306 0.955 0.913 0.665 0.533 -0.0767 17.2 4.639 8 -- --
85.49 0.431 9.32 0.326 0.96 0.874 0.732 -- -0.0742 17.1 4.56 7 -- --
85.92 0.432 9.32 0.303 0.958 0.887 -- 0.644 -0.071 17.1 4.913 7 -- --
86.85 0.434 9.32 0.326 0.967 0.862 -- -- -0.071 17.1 4.639 7 -- --
115.87 0.501 9.33 0.271 -- 1.26 -- 0.847 -0.172 -- -0.01771 267 -- --
97.23 0.462 9.32 0.323 1.17 -- 0.568 -- -0.0804 15.7 -- -- -- --
98.2 0.464 9.32 0.332 1.18 -- -- -- -0.0771 15.7 -- -- -- --
117.27 0.504 9.33 0.268 -- 1.26 -- -- -0.178 -- -0.5843 269 -- --
89.54 0.443 9.33 -- 0.967 0.867 -- -- -0.107 17 4.64 5 -- --
174.77 0.618 9.31 0.283 -- -- -- -- -0.108 -- -- -- -- --
101.1 0.47 9.32 -- 1.17 -- -- -- -0.114 15.7 -- -- -- --
119.16 0.508 9.34 -- -- 1.27 -- -- -0.208 -- -14.63 275 -- --
176.87 0.621 9.32 -- -- -- -- -- -0.14 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.62 temperature 10.0 270 > th dose dependent rect. 9 1
2 71.70 wind 5.0 90 < th dose independent rect. 3 5
3 72.13 temperature 15.0 10 > th dose independent rect. 14 19
4 72.24 wind 5.0 270 < th dose independent rect. 3 2
5 72.28 temperature 15.0 270 > th dose independent rect. 13 17
6 72.35 radiation 40.0 90 < th dose independent rect. 13 19
8 72.49 radiation 40.0 10 < th dose independent rect. 12 21
10 72.54 precipitation 0.1 90 < th dose independent rect. 3 5
11 72.54 precipitation 0.1 90 < th dose dependent rect. 3 5
13 72.70 wind 9.0 90 < th dose independent rect. 8 19
14 72.79 precipitation 0.1 270 < th dose independent rect. 3 2
16 72.79 precipitation 0.1 270 < th dose dependent rect. 3 2
17 72.84 wind 5.0 10 < th dose independent rect. 3 6
18 72.85 wind 9.0 270 < th dose independent rect. 5 22
19 72.86 temperature 10.0 10 > th dose dependent rect. 9 5
25 72.99 temperature 10.0 90 > th dose independent rect. 3 5
27 72.99 temperature 30.0 90 < th dose independent rect. 3 5
28 72.99 humidity 50.0 90 > th dose independent rect. 3 5
30 72.99 atmosphere 995.0 90 > th dose independent rect. 3 5
31 72.99 atmosphere 1015.0 90 < th dose independent rect. 3 5
32 72.99 temperature 10.0 90 > th dose independent rect. 8 19
33 73.00 humidity 50.0 270 > th dose independent rect. 9 1
34 73.02 precipitation 0.1 10 < th dose independent rect. 3 6
36 73.02 precipitation 0.1 10 < th dose dependent rect. 3 6
42 73.12 radiation 40.0 90 < th dose independent rect. 3 5
43 73.15 temperature 10.0 90 > th dose dependent rect. 8 6
44 73.20 temperature 10.0 270 > th dose independent rect. 9 1
45 73.20 atmosphere 995.0 270 > th dose independent rect. 9 1
46 73.20 atmosphere 1015.0 270 < th dose independent rect. 9 1
47 73.20 precipitation 0.1 270 < th dose independent rect. 9 1
48 73.20 temperature 10.0 270 > th dose independent rect. 10 23
49 73.20 precipitation 0.1 270 < th dose dependent rect. 9 1
50 73.22 precipitation 0.1 270 < th dose independent rect. 13 17
51 73.22 precipitation 0.1 270 < th dose dependent rect. 13 17
52 73.23 wind 9.0 270 < th dose independent rect. 9 1
55 73.31 humidity 50.0 270 > th dose independent rect. 6 7
62 73.43 temperature 10.0 270 > th dose dependent rect. 6 6
63 73.46 radiation 1.0 10 > th dose independent rect. 9 5
65 73.50 precipitation 0.1 90 < th dose independent rect. 8 19
66 73.50 precipitation 0.1 90 < th dose dependent rect. 8 19
67 73.51 wind 9.0 270 < th dose independent rect. 6 7
69 73.52 temperature 10.0 270 > th dose independent rect. 3 2
71 73.52 temperature 30.0 270 < th dose independent rect. 3 2
72 73.52 humidity 50.0 270 > th dose independent rect. 3 2
75 73.52 atmosphere 995.0 270 > th dose independent rect. 3 2
76 73.52 atmosphere 1010.0 270 < th dose independent rect. 3 2
78 73.52 radiation 20.0 270 < th dose independent rect. 3 2
81 73.52 wind 9.0 10 < th dose independent rect. 9 18
82 73.52 temperature 10.0 270 > th dose independent rect. 5 22
83 73.52 radiation 1.0 270 < th dose dependent rect. 3 2
84 73.54 radiation 30.0 270 < th dose dependent rect. 3 2
87 73.57 precipitation 0.1 270 < th dose independent rect. 6 7
88 73.57 precipitation 0.1 270 < th dose dependent rect. 6 7
89 73.58 temperature 10.0 270 > th dose independent rect. 6 7
90 73.58 atmosphere 995.0 270 > th dose independent rect. 6 7
91 73.58 atmosphere 1015.0 270 < th dose independent rect. 6 7
94 73.59 radiation 1.0 270 < th dose independent rect. 3 2
96 73.59 temperature 15.0 270 > th dose independent rect. 11 20
102 73.70 precipitation 0.1 90 < th dose independent rect. 8 6
103 73.70 precipitation 0.1 90 < th dose dependent rect. 8 6
104 73.74 temperature 10.0 10 > th dose independent rect. 9 5
106 73.74 atmosphere 995.0 10 > th dose independent rect. 9 5
107 73.74 atmosphere 1015.0 10 < th dose independent rect. 9 5
108 73.74 precipitation 0.1 10 < th dose independent rect. 9 5
109 73.74 precipitation 0.1 10 < th dose independent rect. 9 18
111 73.74 precipitation 0.1 10 < th dose dependent rect. 9 5
112 73.74 precipitation 0.1 10 < th dose dependent rect. 9 18
115 73.76 temperature 10.0 10 > th dose independent rect. 3 6
117 73.76 temperature 30.0 10 < th dose independent rect. 3 6
118 73.76 humidity 50.0 10 > th dose independent rect. 3 6
120 73.76 atmosphere 995.0 10 > th dose independent rect. 3 6
121 73.76 atmosphere 1015.0 10 < th dose independent rect. 3 6
123 73.76 temperature 10.0 10 > th dose independent rect. 9 18
125 73.82 wind 9.0 90 < th dose dependent rect. 3 5
126 73.85 wind 1.0 270 > th dose independent rect. 9 1
128 73.86 precipitation 0.1 10 < th dose independent rect. 14 19
129 73.86 precipitation 0.1 10 < th dose dependent rect. 14 19
132 73.95 temperature 10.0 90 > th dose independent rect. 8 6
133 73.95 atmosphere 995.0 90 > th dose independent rect. 8 6
134 73.95 atmosphere 1015.0 90 < th dose independent rect. 8 6
139 74.02 precipitation 0.1 270 < th dose independent rect. 10 22
140 74.02 precipitation 0.1 270 < th dose dependent rect. 10 22
154 74.07 wind 9.0 10 < th dose independent rect. 9 5
158 74.12 radiation 1.0 270 > th dose independent rect. 9 1
160 74.12 humidity 50.0 90 > th dose independent rect. 8 6
164 74.14 wind 9.0 10 < th dose dependent rect. 3 6
171 74.20 wind 9.0 90 < th dose independent rect. 8 6
172 74.20 wind 9.0 270 < th dose independent rect. 6 20
188 74.26 wind 9.0 270 < th dose independent rect. 13 17
191 74.29 wind 1.0 270 > th dose independent rect. 3 2
224 74.42 wind 9.0 10 < th dose independent rect. 14 19
232 74.45 precipitation 0.1 270 < th dose independent rect. 2 15
233 74.45 atmosphere 995.0 90 > th dose independent rect. 8 19
234 74.45 precipitation 0.1 270 < th dose dependent rect. 2 15
238 74.48 humidity 50.0 10 > th dose independent rect. 9 5
249 74.50 radiation 10.0 270 < th dose independent rect. 17 9
256 74.52 temperature 10.0 1440 > th dose independent rect. 10 5
259 74.52 temperature 10.0 1440 > th dose independent rect. 15 19
269 74.54 wind 1.0 30 > th dose independent rect. 9 5
270 74.56 wind 1.0 270 > th dose independent rect. 1 5
279 74.59 atmosphere 995.0 270 > th dose independent rect. 13 17
281 74.59 atmosphere 995.0 10 > th dose independent rect. 14 19
283 74.59 radiation 20.0 270 < th dose dependent rect. 1 6
289 74.64 radiation 10.0 270 < th dose independent rect. 1 6
306 74.69 radiation 20.0 270 < th dose dependent rect. 2 4
324 74.72 precipitation 0.1 270 < th dose independent rect. 11 20
326 74.72 precipitation 0.1 270 < th dose dependent rect. 11 20
327 74.73 wind 9.0 270 < th dose dependent rect. 3 2
342 74.76 temperature 10.0 270 > th dose independent rect. 6 20
346 74.79 wind 9.0 270 < th dose independent rect. 17 9
352 74.80 temperature 10.0 10 > th dose dependent rect. 9 18
358 74.84 temperature 10.0 1440 > th dose independent rect. 3 7
361 74.84 atmosphere 995.0 1440 > th dose independent rect. 3 7
362 74.84 temperature 10.0 1440 > th dose independent rect. 10 17
369 74.85 wind 9.0 270 < th dose dependent rect. 8 2
398 74.93 wind 1.0 270 > th dose independent rect. 12 18
404 74.94 radiation 40.0 270 < th dose dependent rect. 17 9
410 74.98 humidity 50.0 90 > th dose independent rect. 8 19
419 75.01 temperature 10.0 270 > th dose independent rect. 17 9
423 75.01 temperature 10.0 270 > th dose independent rect. 2 15
424 75.01 atmosphere 1015.0 270 < th dose independent rect. 2 15
426 75.02 atmosphere 995.0 10 > th dose independent rect. 9 18
468 75.14 wind 9.0 270 < th dose dependent rect. 7 4
471 75.15 humidity 50.0 270 > th dose independent rect. 17 9
491 75.26 wind 9.0 270 < th dose dependent rect. 6 7
503 75.33 radiation 1.0 270 > th dose independent rect. 6 7
504 75.33 temperature 10.0 90 > th dose dependent rect. 3 5
506 75.35 temperature 15.0 270 > th dose independent rect. 11 9
507 75.35 radiation 40.0 90 < th dose independent rect. 3 16
514 75.39 atmosphere 995.0 90 > th dose dependent rect. 3 5
516 75.40 radiation 40.0 90 < th dose dependent rect. 3 6
525 75.46 radiation 40.0 10 < th dose dependent rect. 13 20
555 75.52 atmosphere 1000.0 10 > th dose dependent rect. 3 6
560 75.54 atmosphere 1015.0 10 < th dose independent rect. 14 19
575 75.56 humidity 50.0 270 > th dose dependent rect. 3 2
580 75.57 atmosphere 1015.0 1440 < th dose independent rect. 4 6
595 75.62 radiation 1.0 270 > th dose dependent rect. 9 1
606 75.67 humidity 50.0 270 > th dose independent rect. 20 15
618 75.75 precipitation 0.1 270 < th dose independent rect. 6 19
619 75.75 precipitation 0.1 270 < th dose dependent rect. 6 19
629 75.78 temperature 10.0 10 > th dose dependent rect. 3 6
644 75.83 atmosphere 1015.0 270 < th dose independent rect. 11 9
645 75.83 temperature 10.0 270 > th dose independent rect. 20 15
646 75.83 atmosphere 995.0 270 > th dose independent rect. 20 15
649 75.84 wind 9.0 270 < th dose independent rect. 10 22
652 75.85 humidity 90.0 10 < th dose independent rect. 9 5
653 75.85 wind 1.0 270 > th dose independent rect. 11 9
671 75.87 precipitation 0.1 270 < th dose independent rect. 11 9
675 75.87 precipitation 0.1 270 < th dose dependent rect. 11 9
677 75.88 temperature 15.0 270 > th dose independent rect. 23 8
678 75.88 wind 1.0 270 > th dose independent rect. 11 20
680 75.89 atmosphere 995.0 270 > th dose independent rect. 2 15
681 75.89 precipitation 0.1 270 < th dose independent rect. 5 22
684 75.89 precipitation 0.1 270 < th dose dependent rect. 5 22
689 75.91 atmosphere 1015.0 90 < th dose independent rect. 8 19
703 75.95 wind 9.0 270 < th dose independent rect. 11 20
705 75.96 wind 9.0 270 < th dose independent rect. 20 15
710 75.99 wind 9.0 270 < th dose independent rect. 2 15
761 76.11 atmosphere 995.0 270 > th dose independent rect. 17 9
801 76.18 precipitation 0.1 270 < th dose independent rect. 17 9
803 76.18 temperature 30.0 270 < th dose dependent rect. 3 2
805 76.18 precipitation 0.1 270 < th dose dependent rect. 17 9
812 76.21 atmosphere 995.0 270 > th dose independent rect. 11 20
840 76.28 atmosphere 1015.0 10 < th dose independent rect. 9 18
853 76.32 humidity 50.0 270 > th dose independent rect. 6 19
873 76.36 radiation 40.0 90 < th dose dependent rect. 13 19
892 76.39 temperature 10.0 270 > th dose dependent rect. 3 2
908 76.43 humidity 50.0 10 > th dose independent rect. 14 19
961 76.54 atmosphere 995.0 1440 > th dose independent rect. 10 4