BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0495500 Os10g0495500|J090008F03
         (380 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18220.1  | chr2:7928254-7931851 FORWARD LENGTH=765            171   7e-43
AT3G55510.1  | chr3:20579232-20582124 FORWARD LENGTH=595           88   7e-18

>AT2G18220.1 | chr2:7928254-7931851 FORWARD LENGTH=765
          Length = 764

 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 130/217 (59%), Gaps = 17/217 (7%)

Query: 43  LKRLQEKDPEFYKYXXXXXXXXXXXXXXXXXXXXGSAEKHSSVPKEEPK----------- 91
           LKRLQEKDP+F++Y                       E  + +   E +           
Sbjct: 63  LKRLQEKDPDFFQYMKEHDAELLKFDATEIEDD-ADVEPDTDLEDTEKEGDDEATKMEIA 121

Query: 92  ---EIVKPITMQMVDSWCQGAED-GKIGSIRSILEAFRKACHYGEESGNNSAPKFSVMSG 147
               + K IT  MVD+W +  ED  K+G +RSIL A+R ACHYG+++G++ + KFSVMS 
Sbjct: 122 KKVHVQKTITASMVDAWSKSIEDEAKLGGVRSILRAYRTACHYGDDTGDDQSTKFSVMSS 181

Query: 148 SVLDKVMHFVLKNMDRILRELLDAP-SFGGKKETVSELMITKQWKRHGRLMRLYLVNALH 206
            V +K+M +VL  MD ILR+LL  P    G KET+ EL  T+ WK +  L++ YL N+LH
Sbjct: 182 EVFNKIMIYVLSEMDGILRKLLRFPEDTRGTKETILELTNTRPWKNYNHLVKSYLGNSLH 241

Query: 207 MITELTDEQMVAFTVHRVRASAVFLAAFPALLRKYVK 243
           ++ ++TD +M+ FT+ R++ S+VFLAAFP+LLRKY+K
Sbjct: 242 VLNQMTDTEMITFTLRRLKHSSVFLAAFPSLLRKYIK 278




 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 76/130 (58%), Positives = 98/130 (75%), Gaps = 5/130 (3%)

Query: 229 VFLAAFPALLRKYV----KKSYQKVYDWQYIFCLELWTSVVCGCSSEEDLRPLAYPLTQI 284
           VF+     +LR+ +    K++++KVY W++I CLELWT  VC  SS+ +LRP+AYPL QI
Sbjct: 361 VFIRQLAMILREALNTKTKEAFRKVYQWKFIHCLELWTGAVCAYSSQSELRPVAYPLAQI 420

Query: 285 IHGVACLVPSARYFPVRLRCVKMLNRIAEATGTFIPVSSLLLDMLEMKELGGKPD-AVGK 343
           I GVA LVP+ARY P+RLRCV+MLNR+A ATGTFIPVS LL+DMLEMKEL   P   VGK
Sbjct: 421 ITGVARLVPTARYTPLRLRCVRMLNRLAAATGTFIPVSMLLVDMLEMKELNRPPTGGVGK 480

Query: 344 AVNLFSVKQV 353
            V+L ++ +V
Sbjct: 481 GVDLRTLLKV 490



>AT3G55510.1 | chr3:20579232-20582124 FORWARD LENGTH=595
          Length = 594

 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 62/90 (68%)

Query: 243 KKSYQKVYDWQYIFCLELWTSVVCGCSSEEDLRPLAYPLTQIIHGVACLVPSARYFPVRL 302
           K++ +K++  +YI C++LW + +     + DL+PL Y + Q+I+GVA L+   RY  +R+
Sbjct: 357 KEAVEKIHSGEYINCVDLWVNFISANVQDCDLQPLLYTIVQVINGVAQLIIGPRYLLLRV 416

Query: 303 RCVKMLNRIAEATGTFIPVSSLLLDMLEMK 332
           +C+  LN ++  +G FIP++SL+LDMLE K
Sbjct: 417 KCIHWLNHLSRTSGIFIPIASLVLDMLEYK 446




 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 120 ILEAFRKACHYGEESGNNSAPK--FSVMSGSVLDKVMHFVLKNMDRILRELLDAPSFGGK 177
           +L  +R AC YG E    + P   + +       KV+ FVL+  D   R +L   S    
Sbjct: 133 LLNWYRAACQYGHEPSGIARPNIYYDIEDSETFAKVIIFVLQKADHTFRSIL-GLSDSST 191

Query: 178 KETVSELMITKQWKRHGRLMRLYLVNALHMITELTDEQMVAFTVHRVRASAVFLAAFPAL 237
           KE + +L    +W     L++ +  + LH++ +  D ++++FT+ ++R S VFLAAFP L
Sbjct: 192 KEKILKLKNNPKWDSLKPLVKSFFRSTLHLVKQAGDLEIISFTLTQLRVSIVFLAAFPDL 251

Query: 238 LRKYVKKS 245
           L+K +K S
Sbjct: 252 LKKLIKIS 259



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,482,471
Number of extensions: 285370
Number of successful extensions: 658
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 654
Number of HSP's successfully gapped: 4
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)