Os10g0492000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chloroplast inner envelope protein, 110 kD (IEP110) precursor.
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Os10g0492000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chloroplast inner envelope protein, 110 kD (IEP110) precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.3 | 0.471 | 9.4 | -0.00139 | 0.0347 | -0.108 | -0.969 | 2.24 | -0.184 | 1.92 | 20.5 | 848 | -- | -- |
| 103.41 | 0.474 | 9.41 | 0.0395 | 0.206 | -1.01 | -0.228 | -- | -0.162 | 4.28 | 13.11 | 27922 | -- | -- |
| 102.72 | 0.472 | 9.38 | 0.136 | 0.0303 | -0.105 | -- | 2.38 | -0.148 | 2 | 20.52 | 1952 | -- | -- |
| 102.69 | 0.472 | 9.42 | 0.0778 | 0.0666 | -0.992 | -- | -- | -0.141 | 6.1 | 13.2 | 27816 | -- | -- |
| 102.65 | 0.472 | 9.37 | 0.121 | -- | -0.0792 | -- | 2.48 | -0.147 | -- | 20.5 | 1934 | -- | -- |
| 116.04 | 0.505 | 9.47 | -0.533 | 0.0707 | -- | -0.682 | -- | -0.352 | 4.99 | -- | -- | -- | -- |
| 117.04 | 0.507 | 9.47 | -0.53 | 0.088 | -- | -- | -- | -0.349 | 7.54 | -- | -- | -- | -- |
| 102.8 | 0.472 | 9.44 | 0.14 | -- | -1.05 | -- | -- | -0.169 | -- | 13.3 | 27836 | -- | -- |
| 103.03 | 0.473 | 9.43 | -- | 0.0655 | -0.955 | -- | -- | -0.149 | 6.96 | 13.3 | 27826 | -- | -- |
| 117.46 | 0.506 | 9.47 | -0.529 | -- | -- | -- | -- | -0.347 | -- | -- | -- | -- | -- |
| 124.45 | 0.522 | 9.46 | -- | 0.084 | -- | -- | -- | -0.29 | 7.98 | -- | -- | -- | -- |
| 103.29 | 0.473 | 9.44 | -- | -- | -1 | -- | -- | -0.185 | -- | 13.5 | 27892 | -- | -- |
| 124.84 | 0.522 | 9.46 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.32 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 2 | 95.41 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 3 | 96.22 | radiation | 1 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 7 | 96.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 8 | 96.97 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 14 | 97.02 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 17 | 97.07 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 18 | 97.09 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 29 | 97.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 39 | 97.23 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 42 | 97.25 | temperature | 20 | 14400 | < th | dose independent | sin | 14 | NA |
| 47 | 97.28 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 70 | 97.38 | wind | 3 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 74 | 97.39 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 101 | 97.50 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 106 | 97.51 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 111 | 97.52 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 125 | 97.55 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 167 | 97.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 175 | 97.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 194 | 97.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 220 | 97.69 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 270 | 97.77 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 280 | 97.78 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 289 | 97.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 347 | 97.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 360 | 97.88 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 378 | 97.91 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 379 | 97.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 390 | 97.92 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 396 | 97.93 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 433 | 97.99 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 437 | 97.99 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 439 | 97.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 13 |
| 442 | 98.00 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 445 | 98.01 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 448 | 98.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 457 | 98.02 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 467 | 98.04 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 471 | 98.04 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 17 |
| 477 | 98.05 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 480 | 98.06 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 486 | 98.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 506 | 98.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 519 | 98.11 | wind | 3 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 524 | 98.11 | temperature | 25 | 14400 | < th | dose dependent | rect. | 12 | 17 |
| 556 | 98.14 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 567 | 98.15 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 578 | 98.16 | temperature | 25 | 14400 | < th | dose dependent | sin | 14 | NA |
| 581 | 98.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 614 | 98.19 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 661 | 98.23 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 19 |
| 672 | 98.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 727 | 98.28 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 745 | 98.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 793 | 98.32 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 801 | 98.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 824 | 98.33 | temperature | 25 | 14400 | < th | dose dependent | rect. | 23 | 23 |
| 827 | 98.34 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 832 | 98.34 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 861 | 98.35 | temperature | 25 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 997 | 98.45 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |