Os10g0485100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF179 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0485100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF179 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.15 | 0.266 | 8.3 | 0.643 | 1.32 | 0.25 | -0.884 | 0.732 | 0.304 | 5.08 | 0.8597 | 4563 | -- | -- |
| 31.95 | 0.263 | 8.31 | 0.637 | 1.33 | 0.379 | -0.709 | -- | 0.313 | 4.99 | 1.037 | 15132 | -- | -- |
| 34.13 | 0.272 | 8.3 | 0.633 | 1.32 | 0.297 | -- | 0.505 | 0.308 | 5.07 | 0.8464 | 4516 | -- | -- |
| 33.49 | 0.27 | 8.31 | 0.543 | 1.33 | 0.409 | -- | -- | 0.317 | 5.04 | 1.448 | 16965 | -- | -- |
| 123.67 | 0.518 | 8.24 | 0.965 | -- | -0.843 | -- | 4.79 | 0.331 | -- | 0.91 | 5680 | -- | -- |
| 35.79 | 0.28 | 8.32 | 0.727 | 1.33 | -- | -0.824 | -- | 0.278 | 5.06 | -- | -- | -- | -- |
| 37.52 | 0.287 | 8.32 | 0.728 | 1.32 | -- | -- | -- | 0.282 | 5.05 | -- | -- | -- | -- |
| 124.72 | 0.52 | 8.33 | 0.649 | -- | 0.476 | -- | -- | 0.345 | -- | 0.5 | 2576 | -- | -- |
| 39.92 | 0.294 | 8.31 | -- | 1.34 | 0.538 | -- | -- | 0.292 | 5.03 | 1.631 | 27766 | -- | -- |
| 129.13 | 0.531 | 8.33 | 0.775 | -- | -- | -- | -- | 0.316 | -- | -- | -- | -- | -- |
| 51.47 | 0.336 | 8.34 | -- | 1.33 | -- | -- | -- | 0.201 | 5.03 | -- | -- | -- | -- |
| 133.82 | 0.539 | 8.32 | -- | -- | 0.507 | -- | -- | 0.326 | -- | 1.871 | 27772 | -- | -- |
| 144.99 | 0.562 | 8.35 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.79 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 2 | 30.81 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 12 |
| 3 | 30.87 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 7 | 30.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 9 | 30.92 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 16 | 30.95 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 18 | 30.96 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 23 | 30.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 31 | 31.01 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 34 | 31.03 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 38 | 31.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 39 | 31.04 | wind | 1.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 47 | 31.04 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 48 | 31.05 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 52 | 31.05 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 20 | 18 |
| 53 | 31.05 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 18 |
| 55 | 31.06 | wind | 9.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 62 | 31.07 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 88 | 31.10 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 94 | 31.11 | humidity | 50.0 | 720 | > th | dose independent | rect. | 1 | 20 |
| 100 | 31.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 127 | 31.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 162 | 31.17 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 176 | 31.18 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 183 | 31.19 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 185 | 31.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 200 | 31.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 201 | 31.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 10 |
| 209 | 31.21 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 219 | 31.22 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 220 | 31.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 224 | 31.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 230 | 31.23 | wind | 3.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 231 | 31.23 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 244 | 31.24 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 259 | 31.25 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 11 |
| 277 | 31.26 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 309 | 31.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 316 | 31.30 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 340 | 31.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 360 | 31.32 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 370 | 31.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 372 | 31.33 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 10 |
| 379 | 31.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 388 | 31.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 390 | 31.34 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 403 | 31.35 | wind | 3.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 404 | 31.35 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 408 | 31.35 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 438 | 31.36 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 449 | 31.37 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 450 | 31.37 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 452 | 31.37 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 486 | 31.38 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 508 | 31.39 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 519 | 31.40 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 526 | 31.40 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 528 | 31.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 534 | 31.40 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 536 | 31.40 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 537 | 31.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 547 | 31.40 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 551 | 31.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 580 | 31.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 581 | 31.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 594 | 31.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 595 | 31.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 602 | 31.43 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 603 | 31.43 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 622 | 31.43 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 10 |
| 635 | 31.44 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 647 | 31.45 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 683 | 31.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 686 | 31.47 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 714 | 31.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 716 | 31.48 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 756 | 31.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 786 | 31.51 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 894 | 31.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 925 | 31.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 928 | 31.57 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 932 | 31.57 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 940 | 31.57 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 956 | 31.58 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 10 |
| 965 | 31.58 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 980 | 31.59 | humidity | 80.0 | 43200 | < th | dose independent | sin | 10 | NA |