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Os10g0466000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0131) R2 : 0.702
β1 : 1.49 (0.0479) R2dD : 0.656 R2D : 0.477
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.447 (0.0279) R2dN8 : 0.225 R2N8 : 0.0454
σ : 0.245
deviance : 27.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.68 0.198 10.3 1.06 0.254 0.37 -0.599 -0.716 0.25 6.64 21.42 3588 -- --
17.97 0.197 10.2 1.22 0.248 0.529 -0.55 -- 0.326 6.33 19.41 2426 -- --
18.5 0.2 10.3 1.1 0.244 0.38 -- -0.619 0.275 6.39 21.4 2538 -- --
18.7 0.201 10.2 1.21 0.242 0.554 -- -- 0.319 6.41 19.5 2551 -- --
21.55 0.216 10.3 1.12 -- 0.417 -- -0.525 0.282 -- 20.73 2703 -- --
23.43 0.227 10.2 1.49 0.255 -- -0.583 -- 0.439 6.31 -- -- -- --
24.23 0.23 10.2 1.48 0.254 -- -- -- 0.441 5.92 -- -- -- --
21.63 0.217 10.2 1.19 -- 0.597 -- -- 0.32 -- 19.3 2700 -- --
24.18 0.229 10.3 -- 0.246 1.3 -- -- 0.0193 6.72 17.2 47520 -- --
27.56 0.245 10.2 1.49 -- -- -- -- 0.447 -- -- -- -- --
82.01 0.424 10.2 -- 0.277 -- -- -- 0.276 5.66 -- -- -- --
27.32 0.243 10.3 -- -- 1.29 -- -- 0.022 -- 17.1 47520 -- --
85.99 0.433 10.3 -- -- -- -- -- 0.282 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.89 wind 3 43200 < th dose dependent rect. 19 5
4 17.95 temperature 20 4320 > th dose independent rect. 19 4
5 17.96 wind 3 43200 < th dose dependent rect. 20 3
8 17.97 temperature 20 4320 < th dose independent rect. 19 4
10 18.00 wind 1 43200 > th dose independent rect. 23 3
22 18.06 wind 1 43200 < th dose dependent rect. 11 16
24 18.08 wind 3 43200 > th dose independent rect. 19 2
28 18.09 wind 3 43200 < th dose independent rect. 18 4
43 18.12 wind 3 43200 > th dose independent rect. 18 4
45 18.12 wind 1 14400 < th dose dependent rect. 19 9
50 18.13 wind 1 14400 < th dose dependent rect. 21 7
52 18.14 wind 1 43200 > th dose independent rect. 24 1
53 18.14 wind 3 43200 < th dose independent rect. 19 2
85 18.23 temperature 25 4320 < th dose independent rect. 11 4
87 18.23 temperature 25 4320 < th dose independent rect. 10 6
94 18.25 wind 7 43200 < th dose independent rect. 21 2
99 18.25 radiation 1 43200 < th dose dependent rect. 23 6
101 18.26 wind 7 43200 > th dose independent rect. 21 2
103 18.26 temperature 25 4320 > th dose independent rect. 11 4
109 18.26 temperature 20 4320 < th dose dependent rect. 21 3
110 18.26 radiation 1 43200 < th dose dependent rect. 19 10
117 18.27 wind 1 43200 < th dose dependent sin 17 NA
121 18.28 temperature 20 4320 > th dose independent sin 14 NA
122 18.28 radiation 1 43200 > th dose independent rect. 14 1
127 18.28 temperature 20 4320 < th dose dependent rect. 22 1
146 18.30 radiation 1 43200 < th dose independent rect. 14 1
150 18.30 radiation 1 43200 < th dose dependent rect. 14 1
152 18.30 temperature 25 1440 < th dose dependent rect. 2 7
158 18.31 radiation 1 14400 > th dose independent rect. 18 1
176 18.32 temperature 20 4320 < th dose independent sin 14 NA
177 18.32 wind 1 43200 < th dose independent rect. 24 1
178 18.32 radiation 20 43200 < th dose independent rect. 13 1
184 18.32 wind 5 43200 > th dose dependent rect. 22 1
193 18.33 temperature 20 43200 > th dose independent rect. 21 1
194 18.33 temperature 20 43200 < th dose independent rect. 21 1
208 18.33 temperature 20 4320 < th dose independent rect. 17 14
210 18.33 temperature 20 4320 > th dose independent rect. 17 17
211 18.33 radiation 1 43200 < th dose dependent rect. 3 2
223 18.34 radiation 1 43200 < th dose independent rect. 11 4
232 18.34 temperature 20 4320 < th dose independent rect. 17 16
240 18.34 temperature 30 1440 < th dose dependent rect. 2 3
242 18.34 radiation 1 43200 < th dose dependent rect. 11 4
252 18.35 wind 1 43200 < th dose independent rect. 23 3
264 18.35 temperature 30 1440 < th dose dependent rect. 3 1
266 18.35 temperature 10 1440 > th dose dependent rect. 2 3
276 18.36 radiation 30 43200 < th dose independent rect. 3 4
324 18.37 atmosphere 995 43200 < th dose independent rect. 21 16
333 18.37 temperature 10 1440 > th dose dependent rect. 3 1
371 18.38 temperature 25 1440 < th dose dependent sin 8 NA
398 18.39 atmosphere 995 43200 > th dose independent rect. 21 17
433 18.40 temperature 20 1440 < th dose independent rect. 22 15
449 18.40 radiation 20 43200 < th dose dependent rect. 8 1
461 18.40 temperature 25 4320 < th dose dependent rect. 20 17
467 18.41 radiation 20 43200 > th dose independent rect. 9 1
472 18.41 wind 1 43200 > th dose independent rect. 16 10
475 18.41 temperature 20 1440 < th dose independent rect. 23 12
519 18.42 temperature 25 4320 > th dose independent rect. 15 1
522 18.42 wind 1 43200 > th dose independent rect. 19 7
524 18.42 temperature 20 1440 < th dose independent rect. 1 9
531 18.42 temperature 20 1440 > th dose independent rect. 22 15
554 18.42 radiation 1 43200 > th dose dependent rect. 13 1
555 18.42 radiation 40 43200 < th dose dependent rect. 13 1
564 18.42 temperature 25 4320 < th dose dependent rect. 19 9
589 18.43 temperature 25 4320 < th dose independent rect. 15 1
601 18.43 temperature 20 1440 > th dose independent rect. 1 9
604 18.43 temperature 20 1440 > th dose independent rect. 24 11
633 18.43 atmosphere 995 43200 < th dose dependent sin 9 NA
671 18.44 temperature 20 1440 > th dose independent sin 7 NA
672 18.44 temperature 20 1440 < th dose independent sin 7 NA
755 18.45 wind 1 43200 < th dose independent rect. 16 10
826 18.45 temperature 25 4320 < th dose dependent rect. 8 21
855 18.46 temperature 20 4320 > th dose independent rect. 7 17
963 18.47 temperature 25 4320 < th dose dependent no NA NA
984 18.47 atmosphere 995 43200 < th dose dependent rect. 21 13