BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0466000 Os10g0466000|AK073137
         (557 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20310.1  | chr2:8761328-8763083 REVERSE LENGTH=431            117   1e-26
AT4G28690.1  | chr4:14159093-14160876 FORWARD LENGTH=449          111   1e-24
AT4G27660.1  | chr4:13817249-13818027 REVERSE LENGTH=183           90   3e-18
AT5G54150.1  | chr5:21977461-21978237 REVERSE LENGTH=161           85   1e-16
AT5G54148.1  | chr5:21976465-21977032 REVERSE LENGTH=117           69   5e-12

>AT2G20310.1 | chr2:8761328-8763083 REVERSE LENGTH=431
          Length = 430

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 56/83 (67%)

Query: 121 AEKGPVACRDFPHSRHLCSNLPFSTTSHVKYCSMCHCFVCDTPAPCNYWGKGTEIYDHCH 180
            +KG +ACRDFPH RH C+   F++TSH KYC MCHC+VCD  APC YW       DHCH
Sbjct: 106 GQKGEIACRDFPHPRHSCAKYAFNSTSHEKYCDMCHCYVCDIRAPCPYWCIAVSSIDHCH 165

Query: 181 ATDKEKKWKAMRHTFKSKGLPTS 203
           A DKEK WK  R  F++  +PT+
Sbjct: 166 ANDKEKIWKNQREYFRTGYMPTA 188



>AT4G28690.1 | chr4:14159093-14160876 FORWARD LENGTH=449
          Length = 448

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 56/91 (61%), Gaps = 4/91 (4%)

Query: 119 IVAEKGPVACRDFPHSRHLCSNLPFSTTSHVKYCSMCHCFVCDTPAPCNYW-GKGTEIYD 177
           +V +KG VACRDFPH RH C+  PF +T H  +C MCHC+VCDT APC YW   G    D
Sbjct: 83  VVGQKGEVACRDFPHPRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISNTD 142

Query: 178 HCHATDKEKKWKAMRHTFKSKGL---PTSHP 205
           HCHA DKEK W   R   ++  +   P S P
Sbjct: 143 HCHANDKEKTWNDQRECIRTGNMLPRPVSKP 173



>AT4G27660.1 | chr4:13817249-13818027 REVERSE LENGTH=183
          Length = 182

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 119 IVAEKGPVACRDFPHSRHLCSNLPFSTTSHVKYCSMCHCFVCDTPAPCNYWGKGTEIYDH 178
           IV EKG VACRDFPH RHLC   PF ++ H  +C+ C+C+VCD  APC YW   +    H
Sbjct: 94  IVHEKGQVACRDFPHPRHLCLKFPFESSQHSSHCNQCYCYVCDVVAPCAYW-TASFATPH 152

Query: 179 CHATDKEKKWKAMRHTFK 196
           C A +   KWK +R  ++
Sbjct: 153 CEALENS-KWKPIRKLYR 169



>AT5G54150.1 | chr5:21977461-21978237 REVERSE LENGTH=161
          Length = 160

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 117 LQIVAEKGPVACRDFPHSRHLCSNLPFSTTSHVKYCSMCHCFVCDTPAPCNYWGKGTEIY 176
           L+I+ E G VACRD+PH RHLC N PF +TS+  +C +C+C VCD PAPC  W     + 
Sbjct: 80  LEIIHESGQVACRDYPHPRHLCLNFPFGSTSNATHCDLCYCHVCDKPAPCALW-----MS 134

Query: 177 DHCHAT 182
            HC+A+
Sbjct: 135 SHCNAS 140



>AT5G54148.1 | chr5:21976465-21977032 REVERSE LENGTH=117
          Length = 116

 Score = 69.3 bits (168), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 130 DFPHSRHLCSNLPFSTTSHVKYCSMCHCFVCDTPAPCNYWGKGTEIYDHCHATD 183
           D+PH RH C N PF +T +  +C +C+C+VCD PAPC  W   T    HC+A D
Sbjct: 57  DYPHPRHFCLNFPFGSTPNSSHCDLCYCYVCDKPAPCAEWTISTS---HCNAYD 107



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.128    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,366,953
Number of extensions: 406990
Number of successful extensions: 1020
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1019
Number of HSP's successfully gapped: 5
Length of query: 557
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 453
Effective length of database: 8,255,305
Effective search space: 3739653165
Effective search space used: 3739653165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)