Os10g0465900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PfkB domain containing protein.
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Os10g0465900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PfkB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.35 | 0.561 | 6.82 | -1.83 | 1.28 | 2.23 | 0.953 | 1.45 | -0.483 | 7.72 | 9.931 | 723 | -- | -- |
| 143.73 | 0.558 | 6.85 | -2.08 | 1.28 | 2.24 | 0.645 | -- | -0.551 | 7.69 | 5.365 | 724 | -- | -- |
| 144.48 | 0.56 | 6.84 | -1.91 | 1.26 | 2.18 | -- | 0.892 | -0.506 | 7.69 | 5.61 | 737 | -- | -- |
| 144.84 | 0.561 | 6.85 | -2.06 | 1.27 | 2.21 | -- | -- | -0.549 | 7.63 | 5.48 | 724 | -- | -- |
| 176.81 | 0.619 | 6.84 | -1.76 | -- | 1.84 | -- | 1.38 | -0.45 | -- | 2.734 | 1384 | -- | -- |
| 206.32 | 0.673 | 6.79 | -1.51 | 0.778 | -- | 0.195 | -- | -0.208 | 7.06 | -- | -- | -- | -- |
| 206.41 | 0.673 | 6.79 | -1.5 | 0.779 | -- | -- | -- | -0.209 | 7 | -- | -- | -- | -- |
| 178.47 | 0.622 | 6.89 | -2.08 | -- | 1.86 | -- | -- | -0.537 | -- | 7.527 | 1366 | -- | -- |
| 239.19 | 0.72 | 6.78 | -- | 1.18 | 1.14 | -- | -- | -0.218 | 7.09 | 20.7 | 588 | -- | -- |
| 238.36 | 0.721 | 6.81 | -1.49 | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
| 265.98 | 0.763 | 6.75 | -- | 0.763 | -- | -- | -- | -0.0413 | 7.13 | -- | -- | -- | -- |
| 277.12 | 0.775 | 6.8 | -- | -- | 0.998 | -- | -- | -0.177 | -- | 12.08 | 1328 | -- | -- |
| 296.73 | 0.804 | 6.77 | -- | -- | -- | -- | -- | -0.0294 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 140.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 7 | 140.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 9 | 140.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 14 | 141.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 17 | 141.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 18 | 141.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 20 | 141.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 26 | 141.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 50 | 142.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 53 | 142.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 60 | 142.31 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 64 | 142.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 65 | 142.35 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 68 | 142.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 74 | 142.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 85 | 142.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 89 | 142.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 91 | 142.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 102 | 142.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 124 | 142.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 141 | 143.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 13 |
| 155 | 143.14 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 157 | 143.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 161 | 143.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 167 | 143.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 230 | 143.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 400 | 144.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 458 | 144.93 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 471 | 145.00 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 480 | 145.04 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 510 | 145.16 | temperature | 10 | 1440 | > th | dose dependent | sin | 16 | NA |
| 740 | 146.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 917 | 146.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |