Os10g0457400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0457400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.62 | 0.617 | 4.71 | -1.08 | 0.155 | -0.536 | -0.889 | 1.02 | 0.005 | 1.95 | 20.04 | 12 | -- | -- |
| 177.17 | 0.625 | 4.74 | -1.27 | 0.117 | -0.596 | -1.35 | -- | -0.0343 | 1.45 | 20.1 | 29 | -- | -- |
| 174.7 | 0.616 | 4.7 | -1.01 | 0.215 | -0.463 | -- | 1.41 | 0.00948 | 3.07 | 20.1 | 18 | -- | -- |
| 182.98 | 0.63 | 4.73 | -1.27 | 0.162 | -0.598 | -- | -- | -0.0158 | 3.77 | 20.41 | 40 | -- | -- |
| 176.53 | 0.619 | 4.7 | -1.01 | -- | -0.563 | -- | 1.32 | 0.0196 | -- | 20.2 | 20 | -- | -- |
| 191.59 | 0.649 | 4.76 | -1.42 | 0.263 | -- | -1.31 | -- | -0.144 | 1.57 | -- | -- | -- | -- |
| 197.98 | 0.659 | 4.75 | -1.38 | 0.286 | -- | -- | -- | -0.139 | 2.86 | -- | -- | -- | -- |
| 184.09 | 0.632 | 4.73 | -1.2 | -- | -0.647 | -- | -- | -0.00762 | -- | 20.5 | 76 | -- | -- |
| 214.73 | 0.686 | 4.69 | -- | 0.134 | -1.03 | -- | -- | 0.128 | 6.06 | 19.2 | 51 | -- | -- |
| 202.7 | 0.665 | 4.75 | -1.37 | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
| 248.41 | 0.737 | 4.72 | -- | 0.259 | -- | -- | -- | 0.0154 | 2.82 | -- | -- | -- | -- |
| 214.71 | 0.682 | 4.69 | -- | -- | -1.21 | -- | -- | 0.134 | -- | 19.09 | 154 | -- | -- |
| 252.28 | 0.741 | 4.72 | -- | -- | -- | -- | -- | 0.0208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.20 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 23 |
| 5 | 169.88 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 7 | 170.72 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 10 | 171.15 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 22 |
| 14 | 172.10 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 17 | 172.38 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 20 |
| 18 | 172.55 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 18 |
| 19 | 172.55 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 21 |
| 27 | 172.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 28 | 172.68 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 31 | 172.80 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 21 |
| 47 | 172.98 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 23 |
| 50 | 173.08 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 23 |
| 55 | 173.18 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |
| 65 | 173.32 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 68 | 173.36 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 74 | 173.41 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 75 | 173.42 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 85 | 173.51 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 93 | 173.58 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 16 |
| 96 | 173.62 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 98 | 173.66 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 11 |
| 102 | 173.70 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 112 | 173.81 | temperature | 20 | 90 | < th | dose independent | rect. | 10 | 21 |
| 126 | 173.89 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 18 |
| 158 | 174.05 | temperature | 20 | 10 | > th | dose independent | sin | 12 | NA |
| 171 | 174.16 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 175 | 174.21 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 251 | 174.65 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 23 |
| 252 | 174.68 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 23 |
| 259 | 174.75 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 13 |
| 313 | 175.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 314 | 175.10 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 324 | 175.18 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 23 |
| 327 | 175.22 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 15 |
| 346 | 175.37 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 354 | 175.46 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 369 | 175.49 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 385 | 175.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 416 | 175.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 455 | 175.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 460 | 175.89 | radiation | 10 | 720 | < th | dose independent | rect. | 16 | 9 |
| 493 | 176.00 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 23 |
| 520 | 176.12 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 12 |
| 522 | 176.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 538 | 176.18 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 540 | 176.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 544 | 176.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 545 | 176.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 555 | 176.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 565 | 176.27 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 14 |
| 589 | 176.34 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 591 | 176.35 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 17 |
| 602 | 176.39 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 658 | 176.52 | temperature | 25 | 30 | < th | dose dependent | rect. | 16 | 14 |
| 664 | 176.53 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 23 |
| 737 | 176.72 | temperature | 25 | 10 | < th | dose dependent | sin | 14 | NA |
| 741 | 176.73 | temperature | 20 | 30 | > th | dose dependent | sin | 13 | NA |
| 848 | 177.07 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 16 |
| 910 | 177.20 | temperature | 15 | 30 | > th | dose dependent | rect. | 9 | 20 |