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Os10g0456400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.85 (0.0144) R2 : 0.595
β1 : 0.888 (0.0527) R2dD : 0.262 R2D : 0.155
β2 : 0.591 (0.0352) R2dC : 0.251 R2C : 0.204
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.404 (0.0307) R2dN8 : 0.206 R2N8 : 0.0789
σ : 0.271
deviance : 33.41
__
_____
C
peak time of C : 21.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.04 0.253 9.84 0.844 0.656 0.625 -0.289 0.197 0.457 20.6 93.94 85 -- --
29.06 0.251 9.84 0.843 0.657 0.645 -0.292 -- 0.457 20.6 93.98 85 -- --
29.29 0.252 9.84 0.854 0.658 0.632 -- 0.293 0.455 20.7 93.97 90 -- --
29.35 0.252 9.84 0.853 0.656 0.648 -- -- 0.455 20.7 94 85 -- --
51.28 0.335 9.82 0.852 -- 0.262 -- 0.158 0.443 -- 90.53 7 -- --
33.19 0.27 9.85 0.879 0.591 -- -0.251 -- 0.405 21.4 -- -- -- --
33.41 0.271 9.85 0.888 0.591 -- -- -- 0.404 21.5 -- -- -- --
51.32 0.334 9.82 0.853 -- 0.271 -- -- 0.447 -- 90.43 5 -- --
48.29 0.324 9.85 -- 0.665 0.743 -- -- 0.381 20.6 93.84 67 -- --
53.99 0.343 9.83 0.892 -- -- -- -- 0.403 -- -- -- -- --
54.18 0.344 9.87 -- 0.592 -- -- -- 0.306 21.7 -- -- -- --
70.1 0.391 9.84 -- -- 0.349 -- -- 0.368 -- 89.6 14 -- --
74.98 0.404 9.85 -- -- -- -- -- 0.304 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.50 temperature 10.0 270 > th dose dependent rect. 12 17
7 25.03 humidity 80.0 270 > th dose independent rect. 23 6
8 25.03 humidity 50.0 270 > th dose dependent rect. 23 6
9 25.06 temperature 10.0 270 > th dose dependent rect. 23 6
12 25.12 temperature 10.0 270 > th dose dependent rect. 22 8
14 25.16 radiation 40.0 270 < th dose independent rect. 5 6
15 25.17 radiation 1.0 270 < th dose dependent rect. 23 7
16 25.18 radiation 1.0 270 < th dose independent rect. 23 7
18 25.22 temperature 10.0 270 > th dose independent rect. 5 6
19 25.22 atmosphere 995.0 270 > th dose independent rect. 5 6
20 25.22 atmosphere 1015.0 270 < th dose independent rect. 5 6
21 25.22 precipitation 0.1 270 < th dose independent rect. 5 6
22 25.22 temperature 10.0 270 > th dose independent rect. 11 18
23 25.22 precipitation 0.1 270 < th dose dependent rect. 5 6
25 25.24 wind 9.0 270 < th dose independent rect. 5 6
26 25.24 wind 9.0 270 < th dose independent rect. 5 18
33 25.28 temperature 15.0 270 > th dose independent rect. 23 6
42 25.31 temperature 30.0 270 < th dose independent rect. 23 6
43 25.31 humidity 50.0 270 > th dose independent rect. 23 6
46 25.31 atmosphere 995.0 270 > th dose independent rect. 23 6
50 25.31 temperature 10.0 270 > th dose independent rect. 5 18
53 25.32 wind 9.0 270 < th dose independent rect. 23 6
54 25.32 humidity 50.0 270 > th dose independent rect. 5 6
55 25.33 radiation 1.0 270 < th dose independent rect. 23 9
56 25.33 humidity 50.0 270 > th dose independent rect. 5 18
63 25.37 atmosphere 1015.0 270 < th dose independent rect. 23 6
73 25.39 temperature 10.0 90 > th dose independent rect. 13 17
76 25.40 wind 9.0 270 < th dose independent rect. 11 18
77 25.40 precipitation 0.1 270 < th dose independent rect. 11 18
78 25.40 precipitation 0.1 270 < th dose dependent rect. 11 18
89 25.46 wind 9.0 270 < th dose independent rect. 6 16
93 25.49 precipitation 0.1 270 < th dose independent rect. 23 6
96 25.49 precipitation 0.1 270 < th dose dependent rect. 23 6
101 25.51 radiation 1.0 270 < th dose dependent sin 7 NA
104 25.52 temperature 30.0 270 < th dose independent rect. 22 8
105 25.52 humidity 50.0 270 > th dose independent rect. 22 8
108 25.52 atmosphere 995.0 270 > th dose independent rect. 22 8
112 25.52 temperature 10.0 270 > th dose independent rect. 6 16
116 25.53 wind 9.0 270 < th dose independent rect. 22 8
120 25.54 radiation 40.0 10 < th dose independent rect. 13 17
121 25.54 precipitation 0.1 90 < th dose independent rect. 13 17
122 25.54 radiation 40.0 90 < th dose independent rect. 12 18
123 25.54 precipitation 0.1 270 < th dose independent rect. 5 18
124 25.54 precipitation 0.1 90 < th dose dependent rect. 13 17
125 25.54 precipitation 0.1 270 < th dose dependent rect. 5 18
149 25.57 wind 9.0 90 < th dose independent rect. 13 17
158 25.59 wind 9.0 270 < th dose dependent rect. 5 6
174 25.63 temperature 10.0 10 > th dose dependent rect. 14 16
205 25.69 humidity 70.0 10 > th dose dependent rect. 24 7
221 25.75 radiation 1.0 90 > th dose independent rect. 4 9
249 25.76 precipitation 0.1 270 < th dose independent rect. 6 16
250 25.76 atmosphere 995.0 270 > th dose independent rect. 11 18
253 25.76 precipitation 0.1 270 < th dose dependent rect. 6 16
256 25.77 wind 9.0 270 < th dose dependent rect. 23 6
264 25.80 radiation 1.0 270 < th dose independent sin 7 NA
266 25.81 wind 1.0 90 > th dose independent rect. 6 7
268 25.81 temperature 10.0 270 > th dose dependent rect. 5 6
281 25.84 atmosphere 1000.0 270 > th dose independent rect. 1 2
284 25.84 precipitation 0.1 10 < th dose independent rect. 6 7
296 25.84 precipitation 0.1 10 < th dose dependent rect. 6 7
299 25.85 temperature 10.0 10 > th dose independent rect. 6 7
301 25.85 atmosphere 995.0 10 > th dose independent rect. 6 7
302 25.85 atmosphere 1015.0 10 < th dose independent rect. 6 7
304 25.85 temperature 10.0 10 > th dose independent rect. 13 17
306 25.85 atmosphere 1015.0 270 < th dose independent rect. 11 18
325 25.88 radiation 1.0 270 > th dose independent sin 8 NA
329 25.88 humidity 60.0 270 > th dose dependent rect. 1 2
341 25.91 atmosphere 1015.0 90 < th dose independent rect. 13 17
350 25.92 wind 1.0 10 > th dose independent rect. 6 7
351 25.92 wind 9.0 10 < th dose independent rect. 6 7
366 25.93 humidity 90.0 270 < th dose independent rect. 10 8
376 25.95 radiation 40.0 270 < th dose dependent rect. 15 9
382 25.96 wind 9.0 10 < th dose independent rect. 13 17
387 25.97 radiation 1.0 10 > th dose independent rect. 6 7
389 25.97 atmosphere 995.0 270 > th dose independent rect. 5 18
396 25.98 temperature 10.0 1440 > th dose independent rect. 7 7
399 25.98 atmosphere 995.0 1440 > th dose independent rect. 7 7
410 25.98 temperature 10.0 1440 > th dose independent rect. 14 17
434 26.00 radiation 20.0 270 < th dose independent rect. 15 9
442 26.01 humidity 80.0 270 > th dose independent rect. 1 2
445 26.01 temperature 30.0 270 < th dose independent rect. 5 6
493 26.07 atmosphere 995.0 90 > th dose independent rect. 13 17
495 26.07 atmosphere 1015.0 270 < th dose independent rect. 5 18
499 26.07 wind 9.0 270 < th dose independent rect. 3 22
500 26.07 atmosphere 995.0 270 > th dose dependent rect. 24 5
507 26.08 temperature 10.0 270 > th dose dependent rect. 1 3
517 26.10 atmosphere 1015.0 270 < th dose independent rect. 6 16
543 26.12 temperature 15.0 270 > th dose independent rect. 10 8
558 26.13 radiation 1.0 270 > th dose independent rect. 10 9
607 26.16 radiation 40.0 270 < th dose independent rect. 18 16
630 26.17 humidity 50.0 270 > th dose independent rect. 15 9
671 26.20 temperature 10.0 270 > th dose independent rect. 1 2
673 26.20 temperature 30.0 270 < th dose independent rect. 1 2
674 26.20 humidity 50.0 270 > th dose independent rect. 1 2
678 26.20 atmosphere 1010.0 270 < th dose independent rect. 1 2
680 26.20 radiation 1.0 270 < th dose independent rect. 1 2
692 26.20 temperature 10.0 270 > th dose independent rect. 3 22
693 26.20 radiation 1.0 270 < th dose dependent rect. 1 2
700 26.21 wind 9.0 270 < th dose independent rect. 1 2
701 26.21 precipitation 0.1 270 < th dose independent rect. 1 2
705 26.21 humidity 60.0 270 > th dose independent rect. 18 16
706 26.21 radiation 40.0 270 < th dose independent rect. 5 19
707 26.21 precipitation 0.1 270 < th dose dependent rect. 1 2
723 26.23 atmosphere 1010.0 10 < th dose independent rect. 1 6
752 26.25 temperature 30.0 270 < th dose independent rect. 18 15
793 26.29 atmosphere 1000.0 10 > th dose independent rect. 24 7
813 26.30 temperature 10.0 10 > th dose dependent rect. 6 6
820 26.31 precipitation 0.1 270 < th dose independent rect. 10 8
821 26.31 radiation 40.0 270 < th dose independent rect. 6 17
826 26.31 precipitation 0.1 270 < th dose dependent rect. 10 8
872 26.34 atmosphere 1015.0 10 < th dose independent rect. 13 17
904 26.37 precipitation 0.1 270 < th dose independent rect. 18 16
908 26.37 precipitation 0.1 270 < th dose dependent rect. 18 16
944 26.41 radiation 1.0 90 < th dose independent sin 4 NA
998 26.44 temperature 30.0 270 < th dose independent rect. 5 18