BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0456400 Os10g0456400|AK101916
(639 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12700.1 | chr4:7482643-7484328 REVERSE LENGTH=562 633 0.0
AT2G04280.1 | chr2:1480277-1481983 REVERSE LENGTH=569 614 e-176
AT4G08810.1 | chr4:5616204-5617862 REVERSE LENGTH=553 387 e-107
AT2G41150.2 | chr2:17153851-17155633 FORWARD LENGTH=405 81 2e-15
AT3G56750.1 | chr3:21018326-21020192 REVERSE LENGTH=404 78 1e-14
>AT4G12700.1 | chr4:7482643-7484328 REVERSE LENGTH=562
Length = 561
Score = 633 bits (1633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/585 (53%), Positives = 401/585 (68%), Gaps = 73/585 (12%)
Query: 56 HSPDDPLLHPSSHQLTAFLTSATSNSTFLADDSVLRTGEDFXXXXXXXXXXXXXXXXXXX 115
+ P+DPL HPS ++T FLTS SN+T +DDS+++TGEDF
Sbjct: 48 YEPEDPLFHPSD-KITTFLTS-NSNATLKSDDSIVKTGEDFMAANQTAFGG--------- 96
Query: 116 XXXXVPFIKLEDVATKEESSGAERAVTVDTXXXXXXXXXXXXNPIVEAVSCDTEAPVDCT 175
FI + DV T E S + + CDT P+DC
Sbjct: 97 ------FINIADVETSENDSDGNQ------------------------LDCDTNIPIDCK 126
Query: 176 GDKDLFNLLMRTAIEKFSDLHFYRFGRPVAVPGSPMECDLAWRFRPAEDTNGRTTYYKDY 235
D ++F+L+M+ +EKF D HFY+FG+PV V GS CD+AWR+RP + +YKDY
Sbjct: 127 -DPEVFHLMMKATMEKFKDSHFYKFGKPVIVEGSSSSCDMAWRYRPKDGK--AAAFYKDY 183
Query: 236 RRFTLTRDVNTCNLVVGNVGEYHSGTGAXXXXXXXXXXXXXXXXEAPVTDFVPAKTQMRL 295
RRF + + N C++ V +GEYHSG A V DF
Sbjct: 184 RRFVIEKSGN-CSVSVMGIGEYHSGVNARKRKRPGFRNSSG----GKVDDFALP------ 232
Query: 296 XXXXXXXXXXXXXXPELVVGEAVNDNLPVVESESEFSRGKYLIYMGGGERCKSMNHYVWG 355
VVGEAVND+LPVVESE+ F G YL+Y GGG+RCKSMNH++W
Sbjct: 233 -----------------VVGEAVNDSLPVVESENVFKEGHYLVYSGGGDRCKSMNHFLWS 275
Query: 356 FLCALGEAQYLNRTLVMDLNVCLNSRYTSSGKDEE-RDFRLYFDFEHLKQSASVIDQSQF 414
FLCALGEAQYLNRTLVMDL +CL+S YT SG++EE +DFR YFDFEHLK++AS++DQ QF
Sbjct: 276 FLCALGEAQYLNRTLVMDLTLCLSSVYTLSGQNEEGKDFRFYFDFEHLKEAASMLDQVQF 335
Query: 415 WTDWGKWHKKDRLKNHYTEDIKVTPMQLRDVKDTLIMRKFGNVEPDNFWSRVCEGETEAV 474
W DWGKW+KK+ LK H ED +VTPM+L DVKDTLIMRKFG VEPDN+W RVCEGETE+V
Sbjct: 336 WADWGKWYKKNGLKLHLVEDFRVTPMKLVDVKDTLIMRKFGTVEPDNYWYRVCEGETESV 395
Query: 475 IKRPWYLLWKSRRLMEIVSAISSRMDWDFDSVHVVRGEKAQNKQLWPNLDRDTSPDSLLT 534
++RPW LLWKS+RLMEIVSAI+SR++WD+D++H+ RG+KA+NK++WPNL++DTSP S+L+
Sbjct: 396 VQRPWNLLWKSKRLMEIVSAIASRLNWDYDAIHIERGDKARNKEVWPNLEKDTSPSSILS 455
Query: 535 TLNDKVGAGRHLYIATNEPDKSFFDPMKGKYRTHFLDDFKDLWDENSEWYTETKELSNGN 594
TL DK+ GR+LYIATNEP+ SFF+P+K KY+ HFLD+FKDLWDE+SEWY+ET +L+ GN
Sbjct: 456 TLQDKIEQGRNLYIATNEPELSFFNPLKDKYKPHFLDEFKDLWDESSEWYSETTKLNGGN 515
Query: 595 AVEFDGYMRVAVDTEVFLRGKRKLETFSDLTRDCKNGVNTCPASS 639
VEFDGYMR +VDTEVFLRGK+++ETF+DLT DC++G+ TC ++
Sbjct: 516 PVEFDGYMRASVDTEVFLRGKKQIETFNDLTNDCRDGIGTCNVAA 560
>AT2G04280.1 | chr2:1480277-1481983 REVERSE LENGTH=569
Length = 568
Score = 614 bits (1583), Expect = e-176, Method: Compositional matrix adjust.
Identities = 312/587 (53%), Positives = 399/587 (67%), Gaps = 69/587 (11%)
Query: 56 HSPDDPLLHPSSHQLTAFLTSATSNSTFLADDSVLRTGEDFXXXXXXXXXXXXXXXXXXX 115
+ P+DPL HPS ++T FLTS TSN+T +DDSV++TGEDF
Sbjct: 47 YEPEDPLFHPSD-KITTFLTS-TSNATLRSDDSVVKTGEDFMLANQTAF----------- 93
Query: 116 XXXXVPFIKLEDVATKEESSGAERAVTVDTXXXXXXXXXXXXNPIVEAVSCDTEAPVDCT 175
FI + DV E+S E + + CD P+DC
Sbjct: 94 ----AEFININDV----EASTNETTTEEEG----------------NKLECDVNTPIDCK 129
Query: 176 GDKDLFNLLMRTAIEKFSDLHFYRFGRPVAVPGSPMECDLAWRFRPAEDTNGRTTYYKDY 235
D+ +F+L+MR I+KF D+HFY+FG+PV CD+AWR+RP + + +YKDY
Sbjct: 130 -DQQVFHLMMRATIDKFKDIHFYKFGKPVTGEEGVNSCDMAWRYRPRDGKSA--AFYKDY 186
Query: 236 RRFTLTRDVNTCNLVVGNVGEYHSGTGAXXXXXXXXXXXXXXXXEAPVTDFVPAKTQMRL 295
RRF + + N C++ V +GEYHSG A K +
Sbjct: 187 RRFVVAKSEN-CSVSVVGIGEYHSGLNARKR-----------------------KKNQKA 222
Query: 296 XXXXXXXXXXXXXXPELVVGEAVNDNLPVVESESEFSRGKYLIYMGGGERCKSMNHYVWG 355
P VVGE VND+LP+VES+S F GKYL+Y+GGG+RCKSMNH++W
Sbjct: 223 GFEKTGGKKDDFSLP--VVGELVNDSLPMVESDSVFKTGKYLVYVGGGDRCKSMNHFLWS 280
Query: 356 FLCALGEAQYLNRTLVMDLNVCLNSRYTSSGKDEE-RDFRLYFDFEHLKQSASVIDQSQF 414
FLCALGEAQYLNRTLVMDL +CL+S YTSSG++EE +DFR YFDFEHLK++ASV+D++QF
Sbjct: 281 FLCALGEAQYLNRTLVMDLTLCLSSIYTSSGQNEEGKDFRFYFDFEHLKEAASVLDEAQF 340
Query: 415 WTDWGKWHKK--DRLKNHYTEDIKVTPMQLRDVKDTLIMRKFGNVEPDNFWSRVCEGETE 472
W WGK KK +RL H ED +VTPM+L VKDTLIMRKFG+VEPDN+W RVCEG+ E
Sbjct: 341 WAQWGKLRKKRRNRLNLHLVEDFRVTPMKLAAVKDTLIMRKFGSVEPDNYWYRVCEGDAE 400
Query: 473 AVIKRPWYLLWKSRRLMEIVSAISSRMDWDFDSVHVVRGEKAQNKQLWPNLDRDTSPDSL 532
+V+KRPW+LLWKSRRLMEIVSAI+SR++WD+D+VH+ RGEKA+NK++WPNL+ DTSP +L
Sbjct: 401 SVVKRPWHLLWKSRRLMEIVSAIASRLNWDYDAVHIERGEKARNKEVWPNLEADTSPSAL 460
Query: 533 LTTLNDKVGAGRHLYIATNEPDKSFFDPMKGKYRTHFLDDFKDLWDENSEWYTETKELSN 592
L+TL DKV GRHLYIATNE + SFF+P+K KY THFL D+KDLWDE+SEWY+ET +L+
Sbjct: 461 LSTLQDKVEEGRHLYIATNEGELSFFNPLKDKYATHFLYDYKDLWDESSEWYSETTKLNG 520
Query: 593 GNAVEFDGYMRVAVDTEVFLRGKRKLETFSDLTRDCKNGVNTCPASS 639
GN VEFDGYMR +VDTEVFLRGK+++ETF+DLT DCK+GV TC A++
Sbjct: 521 GNPVEFDGYMRASVDTEVFLRGKKQIETFNDLTNDCKDGVGTCNAAT 567
>AT4G08810.1 | chr4:5616204-5617862 REVERSE LENGTH=553
Length = 552
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/321 (57%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 318 VNDNLPVVESESEFSRGKYLIYMGGGERCKSMNHYVWGFLCALGEAQYLNRTLVMDLNVC 377
+ND +P + S++ F RGKYL Y GG+ CK MN Y+W FLC LGEA YLNRT VMDL++C
Sbjct: 232 INDTIPTLGSQTSFRRGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAMYLNRTFVMDLSLC 291
Query: 378 LNSRYTSSGKDEE-RDFRLYFDFEHLKQSASVIDQSQFWTDWGKWHK--KDRLKNHYTED 434
L+S Y+S GKDEE +DFR YFDFEHLK++AS++++ +F DW KW++ K ++ +
Sbjct: 292 LSSSYSSKGKDEEGKDFRYYFDFEHLKETASIVEEGEFLRDWKKWNRLHKRKVPVRKVKT 351
Query: 435 IKVTPMQLRDVKDTLIMRKFGNVEPDNFWSRVCEGETEAVIKRPWYLLWKSRRLMEIVSA 494
+V+P+QL K T+I R+F EP+N+W RVCEG+ ++RPW+ LWKS+RLM IVS
Sbjct: 352 HRVSPLQLSKDKSTIIWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKSKRLMNIVSE 411
Query: 495 ISSRMDWDFDSVHVVRGEKAQNKQLWPNLDRDTSPDSLLTTLNDKVGAGRHLYIATNEPD 554
IS +MDWDFD+VHVVRGEKA+NK+LWP+LD DT PD++LT L V R+LY+ATNEP
Sbjct: 412 ISGKMDWDFDAVHVVRGEKAKNKKLWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEPF 471
Query: 555 KSFFDPMKGKYRTHFLDDFKDLWDENSEWYTETKELSNGNAVEFDGYMRVAVDTEVFLRG 614
++FD ++ +Y+ H LDD+ LW SEWY ET L+NG VEFDGYMRVAVDTEVF RG
Sbjct: 472 YNYFDKLRSQYKVHLLDDYSYLWGNKSEWYNETSLLNNGKPVEFDGYMRVAVDTEVFYRG 531
Query: 615 KRKLETFSDLTRDCKNGVNTC 635
K ++ETF +LT DCK+G+NTC
Sbjct: 532 KTRVETFYNLTTDCKDGINTC 552
>AT2G41150.2 | chr2:17153851-17155633 FORWARD LENGTH=405
Length = 404
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 130/317 (41%), Gaps = 40/317 (12%)
Query: 344 ERCKSMNHYVWGFLCALGEAQYLNRTLVMDLNVCLNSRYTSSG-----KDEERD------ 392
E C + H CAL EA +LNRT VM +C+N + G +E R+
Sbjct: 85 ETCAGLGHQESSLRCALEEAMFLNRTFVMPSRMCINPIHNKKGILNRSNNETREESWEVS 144
Query: 393 ---FRLYFDFEHLKQSASVI-DQSQFWTDWGKWHKKDRLKNHYTEDI-KVTPMQLRDVKD 447
+D + + + VI D S+ W K LK + + +L D D
Sbjct: 145 SCAMESLYDIDLISEKIPVILDDSETWHIMLSTSMK--LKERGSAHVYGANRHELNDSSD 202
Query: 448 TLIMRKFGNVEPDNFWSRVCE---GETEAVIKRPWYLLWKSRRLMEIVSAISSRMDWDFD 504
+ W C+ ++ ++ + + RL + I +++ D+D
Sbjct: 203 FTNLLLINRTASPLAWFVECKDRGNRSDVMLPYSFLQTMAASRLRDAAEKIKAKLG-DYD 261
Query: 505 SVHVVRGEKAQNKQ--------LWPNLDRDTSPDSLLTTLNDKVGAGRHLYIATNEPDKS 556
++HV RG+K + ++ +P+LDRDT P+ ++ + ++ GR L+I +NE
Sbjct: 262 AIHVRRGDKLKTRKDRFRVERSQFPHLDRDTRPEFIIGRIQKQIPPGRTLFIGSNERTPD 321
Query: 557 FFDPMKGKYRTHFLDDFKDLWDENSEWYTETKELSNGNAVEFDGYMRVAVDTEVFLRGKR 616
FF P+ +Y+ + +F ++ D E N F + + + F + R
Sbjct: 322 FFSPLAIRYKVAYSSNFSEILDPIIE----------NNYQLFMVERLIMMGAKTFFKTFR 371
Query: 617 KLETFSDLTRDCKNGVN 633
+ ET LT D K N
Sbjct: 372 EYETDLTLTDDPKKNKN 388
>AT3G56750.1 | chr3:21018326-21020192 REVERSE LENGTH=404
Length = 403
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 31/262 (11%)
Query: 344 ERCKSMNHYVWGFLCALGEAQYLNRTLVMDLNVCLNSRYTSSGKDEERDFRL-------- 395
E C + H CAL EA +LNRT VM +C+N + G D +
Sbjct: 85 ETCAGLGHQESSLRCALEEAMFLNRTFVMPSGMCINPIHNKKGILNRSDNKTTEEGWLGS 144
Query: 396 ------YFDFEHLKQSASVI-DQSQFWTDWGKWHKK--DRLKNHYTEDIKVTPMQLRDVK 446
+D + + + VI D S+ W K +R H + VT +L++
Sbjct: 145 SCAMDSLYDIDLISEKIPVILDDSKTWHIVLSTSMKLGERGIAHVS---GVTRHRLKESH 201
Query: 447 DTLIMRKFGNVEPDNFWSRVCEGETEAVIKRPWYLL--WKSRRLMEIVSAISSRMDWDFD 504
+ ++ P ++ + + + P+ L + +L I +++ D+D
Sbjct: 202 YSNLLIINRTASPLAWFVECKDRSNRSAVMLPYSFLPNMAAAKLRNAAEKIKAQLG-DYD 260
Query: 505 SVHVVRGEKAQNKQ--------LWPNLDRDTSPDSLLTTLNDKVGAGRHLYIATNEPDKS 556
++HV RG+K + ++ +P+LDRDT P+ +L + ++ GR L+I +NE
Sbjct: 261 AIHVRRGDKLKTRKDRFGVERIQFPHLDRDTRPEFILRRIEKRIPRGRTLFIGSNERKPG 320
Query: 557 FFDPMKGKYRTHFLDDFKDLWD 578
FF P+ +Y+ + +F ++ D
Sbjct: 321 FFSPLAVRYKLAYSSNFSEILD 342
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,297,485
Number of extensions: 502944
Number of successful extensions: 1034
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1017
Number of HSP's successfully gapped: 8
Length of query: 639
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 534
Effective length of database: 8,227,889
Effective search space: 4393692726
Effective search space used: 4393692726
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)