Os10g0446200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0446200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.8 | 0.338 | 8.47 | -0.885 | 1.13 | 1.68 | 1.11 | 0.0328 | 0.177 | 22.5 | 8.132 | 5629 | -- | -- |
| 51.8 | 0.335 | 8.47 | -0.892 | 1.13 | 1.68 | 1.11 | -- | 0.177 | 22.5 | 8.569 | 5627 | -- | -- |
| 56.84 | 0.351 | 8.47 | -0.9 | 1.13 | 1.7 | -- | 0.17 | 0.178 | 22.4 | 8.227 | 5630 | -- | -- |
| 56.83 | 0.351 | 8.47 | -0.945 | 1.13 | 1.69 | -- | -- | 0.169 | 22.4 | 8.73 | 5630 | -- | -- |
| 98.65 | 0.463 | 8.43 | -0.616 | -- | 2.14 | -- | 0.322 | 0.196 | -- | 16.55 | 847 | -- | -- |
| 98.66 | 0.466 | 8.39 | -0.0875 | 1.17 | -- | 1.21 | -- | 0.531 | 22.7 | -- | -- | -- | -- |
| 104.66 | 0.479 | 8.39 | -0.135 | 1.16 | -- | -- | -- | 0.528 | 22.6 | -- | -- | -- | -- |
| 98.36 | 0.462 | 8.45 | -0.73 | -- | 2.14 | -- | -- | 0.162 | -- | 16.8 | 846 | -- | -- |
| 70.64 | 0.391 | 8.42 | -- | 1.09 | 1.04 | -- | -- | 0.415 | 22.3 | 21.2 | 4070 | -- | -- |
| 188.12 | 0.641 | 8.36 | -0.114 | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
| 105.14 | 0.48 | 8.39 | -- | 1.16 | -- | -- | -- | 0.543 | 22.6 | -- | -- | -- | -- |
| 110.82 | 0.49 | 8.42 | -- | -- | 1.83 | -- | -- | 0.279 | -- | 17.42 | 831 | -- | -- |
| 188.47 | 0.641 | 8.36 | -- | -- | -- | -- | -- | 0.546 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.99 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 12 | 46.36 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 16 | 46.40 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 34 | 48.07 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 35 | 48.20 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 37 | 48.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 22 |
| 39 | 48.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 19 |
| 45 | 48.54 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 47 | 48.55 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 48 | 48.55 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 60 | 48.69 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 68 | 48.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 70 | 48.90 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 92 | 49.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 95 | 49.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 99 | 49.31 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 101 | 49.35 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 103 | 49.36 | radiation | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 113 | 49.41 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 139 | 49.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 142 | 49.61 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 204 | 49.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 251 | 49.87 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 255 | 49.87 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 22 |
| 261 | 49.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 22 |
| 281 | 49.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 17 |
| 319 | 49.94 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 417 | 50.38 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 418 | 50.39 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 428 | 50.42 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 15 |
| 447 | 50.46 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 498 | 50.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 515 | 50.81 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 10 |
| 526 | 50.84 | radiation | 1 | 14400 | > th | dose independent | sin | 9 | NA |
| 572 | 50.87 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 602 | 50.90 | radiation | 1 | 14400 | > th | dose independent | sin | 5 | NA |
| 604 | 50.90 | radiation | 1 | 14400 | < th | dose independent | sin | 5 | NA |
| 754 | 51.13 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 758 | 51.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 819 | 51.28 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 827 | 51.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 830 | 51.31 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 842 | 51.32 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 845 | 51.34 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 905 | 51.36 | radiation | 1 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 923 | 51.43 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 925 | 51.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 989 | 51.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 4 |