Os10g0407500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exonuclease domain containing protein.
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Os10g0407500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exonuclease domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.49 | 0.213 | 9.44 | 0.673 | 0.492 | -0.566 | -0.00243 | -1.13 | 0.426 | 20.8 | 5.108 | 4640 | -- | -- |
| 21.29 | 0.215 | 9.46 | 0.679 | 0.498 | -0.408 | -0.023 | -- | 0.398 | 20.8 | 5.593 | 4731 | -- | -- |
| 20.49 | 0.211 | 9.44 | 0.673 | 0.492 | -0.566 | -- | -1.13 | 0.426 | 20.8 | 5.107 | 4641 | -- | -- |
| 21.24 | 0.215 | 9.47 | 0.685 | 0.489 | -0.4 | -- | -- | 0.388 | 20.9 | 5.6 | 4641 | -- | -- |
| 32.86 | 0.267 | 9.42 | 0.682 | -- | -0.632 | -- | -1.48 | 0.42 | -- | 5.2 | 4347 | -- | -- |
| 23.7 | 0.228 | 9.46 | 0.826 | 0.478 | -- | 0.0176 | -- | 0.396 | 21.2 | -- | -- | -- | -- |
| 23.7 | 0.228 | 9.46 | 0.826 | 0.478 | -- | -- | -- | 0.396 | 21.2 | -- | -- | -- | -- |
| 33.74 | 0.271 | 9.46 | 0.69 | -- | -0.422 | -- | -- | 0.372 | -- | 6 | 4425 | -- | -- |
| 24.74 | 0.232 | 9.51 | -- | 0.517 | -0.714 | -- | -- | 0.229 | 21 | 7.5 | 41256 | -- | -- |
| 36.93 | 0.284 | 9.45 | 0.827 | -- | -- | -- | -- | 0.394 | -- | -- | -- | -- | -- |
| 41.67 | 0.302 | 9.48 | -- | 0.478 | -- | -- | -- | 0.305 | 21.3 | -- | -- | -- | -- |
| 37.86 | 0.287 | 9.5 | -- | -- | -0.671 | -- | -- | 0.156 | -- | 7.424 | 47520 | -- | -- |
| 54.97 | 0.346 | 9.47 | -- | -- | -- | -- | -- | 0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.46 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 2 | 18.57 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 3 | 18.59 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 7 | 18.82 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 8 | 18.85 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 11 | 18.95 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 19 | 19.20 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 21 | 19.23 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 29 | 19.32 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 34 | 19.38 | wind | 5.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 40 | 19.45 | wind | 5.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 47 | 19.48 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 83 | 19.70 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 99 | 19.76 | wind | 5.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 123 | 19.83 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 124 | 19.84 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 213 | 20.04 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 223 | 20.05 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 15 |
| 227 | 20.06 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 15 |
| 243 | 20.08 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 13 |
| 266 | 20.11 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 18 |
| 299 | 20.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 308 | 20.16 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 309 | 20.16 | wind | 5.0 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 310 | 20.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 318 | 20.16 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 20 |
| 351 | 20.20 | temperature | 25.0 | 720 | < th | dose independent | sin | 14 | NA |
| 352 | 20.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 384 | 20.22 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 391 | 20.23 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 18 |
| 400 | 20.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 410 | 20.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 428 | 20.25 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 16 | 16 |
| 434 | 20.26 | wind | 5.0 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 445 | 20.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 457 | 20.28 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 459 | 20.28 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 515 | 20.33 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 520 | 20.33 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 555 | 20.37 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 589 | 20.39 | temperature | 25.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 599 | 20.40 | temperature | 20.0 | 4320 | > th | dose independent | sin | 17 | NA |
| 609 | 20.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 611 | 20.41 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 617 | 20.41 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 629 | 20.42 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 20 |
| 641 | 20.42 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 648 | 20.43 | wind | 3.0 | 720 | < th | dose independent | rect. | 23 | 4 |
| 664 | 20.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 665 | 20.44 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 10 |
| 680 | 20.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 710 | 20.45 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 712 | 20.45 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 743 | 20.47 | temperature | 20.0 | 4320 | < th | dose independent | sin | 17 | NA |
| 785 | 20.48 | temperature | 15.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 800 | 20.48 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 15 |
| 807 | 20.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 827 | 20.49 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 23 |
| 847 | 20.50 | wind | 3.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 855 | 20.50 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 17 |
| 860 | 20.50 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 886 | 20.51 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 891 | 20.51 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 7 |
| 900 | 20.51 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 929 | 20.52 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 973 | 20.52 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 20 |
| 986 | 20.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 993 | 20.53 | wind | 3.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 994 | 20.53 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 995 | 20.53 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |