Os10g0407400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0407400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.37 | 0.543 | 3.52 | -0.176 | 0.773 | 1.06 | 0.585 | 2.64 | 0.462 | 15.7 | 68.54 | 1617 | -- | -- |
| 140.33 | 0.552 | 3.52 | 0.1 | 0.928 | 1.24 | 0.428 | -- | 0.536 | 16.2 | 66.45 | 1819 | -- | -- |
| 134.26 | 0.54 | 3.52 | -0.147 | 0.763 | 1.07 | -- | 2.5 | 0.467 | 15.5 | 68.09 | 1598 | -- | -- |
| 140.79 | 0.553 | 3.52 | 0.109 | 0.922 | 1.24 | -- | -- | 0.534 | 16 | 66.34 | 1797 | -- | -- |
| 151.51 | 0.573 | 3.52 | -0.134 | -- | 1.33 | -- | 2.23 | 0.483 | -- | 70 | 1253 | -- | -- |
| 166.58 | 0.605 | 3.55 | 0.132 | 0.664 | -- | 0.359 | -- | 0.387 | 15.7 | -- | -- | -- | -- |
| 166.93 | 0.605 | 3.55 | 0.138 | 0.664 | -- | -- | -- | 0.389 | 15.5 | -- | -- | -- | -- |
| 157.23 | 0.584 | 3.51 | 0.115 | -- | 1.4 | -- | -- | 0.531 | -- | 68.44 | 1213 | -- | -- |
| 141.09 | 0.553 | 3.52 | -- | 0.917 | 1.26 | -- | -- | 0.528 | 16 | 67 | 1783 | -- | -- |
| 191.59 | 0.647 | 3.55 | 0.11 | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
| 167.44 | 0.605 | 3.55 | -- | 0.661 | -- | -- | -- | 0.374 | 15.5 | -- | -- | -- | -- |
| 157.55 | 0.585 | 3.51 | -- | -- | 1.41 | -- | -- | 0.52 | -- | 69 | 1215 | -- | -- |
| 191.91 | 0.647 | 3.55 | -- | -- | -- | -- | -- | 0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.96 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 130.98 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 4 | 131.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 5 | 131.22 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 8 | 131.26 | humidity | 90 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 11 | 131.32 | humidity | 90 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 16 | 131.49 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 21 | 131.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 29 | 131.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 35 | 131.57 | humidity | 80 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 115 | 132.03 | temperature | 25 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 127 | 132.07 | humidity | 80 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 145 | 132.10 | temperature | 30 | 14400 | < th | dose independent | sin | 7 | NA |
| 150 | 132.13 | temperature | 30 | 14400 | > th | dose independent | sin | 7 | NA |
| 171 | 132.16 | humidity | 70 | 1440 | > th | dose dependent | rect. | 19 | 19 |
| 172 | 132.17 | humidity | 90 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 193 | 132.21 | humidity | 80 | 1440 | > th | dose dependent | sin | 3 | NA |
| 215 | 132.28 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 221 | 132.32 | wind | 5 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 257 | 132.42 | humidity | 80 | 1440 | > th | dose dependent | rect. | 4 | 11 |
| 258 | 132.43 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 290 | 132.57 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 17 |
| 301 | 132.61 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 305 | 132.62 | wind | 3 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 307 | 132.63 | temperature | 30 | 14400 | > th | dose dependent | sin | 7 | NA |
| 504 | 133.07 | wind | 3 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 555 | 133.24 | wind | 1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 564 | 133.29 | humidity | 70 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 592 | 133.35 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 604 | 133.37 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 650 | 133.45 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 743 | 133.46 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 957 | 133.64 | humidity | 80 | 1440 | > th | dose dependent | rect. | 5 | 7 |