Os10g0400900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Colon cancer-associated Mic1-like domain containing protein.
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Os10g0400900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Colon cancer-associated Mic1-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.8 | 0.193 | 9.6 | 0.201 | 0.195 | 0.798 | -0.346 | 0.229 | 0.062 | 6.45 | 25 | 124 | -- | -- |
| 16.89 | 0.191 | 9.6 | 0.227 | 0.192 | 0.793 | -0.307 | -- | 0.0716 | 6.43 | 25.16 | 129 | -- | -- |
| 17 | 0.192 | 9.6 | 0.212 | 0.194 | 0.812 | -- | 0.172 | 0.0682 | 7.24 | 25.04 | 123 | -- | -- |
| 17.05 | 0.192 | 9.6 | 0.234 | 0.188 | 0.803 | -- | -- | 0.0735 | 7.27 | 25.19 | 125 | -- | -- |
| 18.28 | 0.199 | 9.6 | 0.234 | -- | 0.834 | -- | 0.129 | 0.101 | -- | 26.42 | 198 | -- | -- |
| 25.77 | 0.238 | 9.63 | 0.0398 | 0.274 | -- | -0.419 | -- | -0.083 | 5.08 | -- | -- | -- | -- |
| 26.21 | 0.24 | 9.63 | 0.0404 | 0.272 | -- | -- | -- | -0.0809 | 5.23 | -- | -- | -- | -- |
| 18.31 | 0.199 | 9.6 | 0.255 | -- | 0.826 | -- | -- | 0.101 | -- | 26.55 | 205 | -- | -- |
| 18.39 | 0.2 | 9.6 | -- | 0.201 | 0.709 | -- | -- | 0.0482 | 6.81 | 25.2 | 127 | -- | -- |
| 30.08 | 0.256 | 9.64 | 0.0499 | -- | -- | -- | -- | -0.0741 | -- | -- | -- | -- | -- |
| 26.25 | 0.24 | 9.63 | -- | 0.273 | -- | -- | -- | -0.0854 | 5.22 | -- | -- | -- | -- |
| 19.85 | 0.207 | 9.61 | -- | -- | 0.732 | -- | -- | 0.0566 | -- | 26.66 | 183 | -- | -- |
| 30.14 | 0.256 | 9.64 | -- | -- | -- | -- | -- | -0.0796 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 5 | 16.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 14 |
| 7 | 16.32 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 13 | 16.39 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 15 | 16.47 | temperature | 15 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 16 | 16.47 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 18 | 16.51 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 50 | 16.83 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 54 | 16.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 58 | 16.87 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 65 | 16.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 72 | 16.92 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 73 | 16.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 93 | 16.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 114 | 17.06 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 123 | 17.09 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 450 | 17.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 469 | 17.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 470 | 17.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 478 | 17.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 480 | 18.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 539 | 18.13 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 20 |
| 571 | 18.18 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 579 | 18.20 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 8 |
| 580 | 18.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 593 | 18.21 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 10 |
| 714 | 18.40 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 760 | 18.45 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 764 | 18.46 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 818 | 18.51 | temperature | 25 | 720 | > th | dose independent | sin | 16 | NA |
| 834 | 18.53 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 894 | 18.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 984 | 18.70 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 13 |
| 995 | 18.71 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |