BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0400900 Os10g0400900|AK072620
         (725 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12010.1  | chr3:3821337-3825537 FORWARD LENGTH=683            704   0.0  

>AT3G12010.1 | chr3:3821337-3825537 FORWARD LENGTH=683
          Length = 682

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/713 (49%), Positives = 480/713 (67%), Gaps = 49/713 (6%)

Query: 17  QGGLGSPGALSHAYVQHPPLRCDIPDIRGLFYDDANKFLIAPTADRILYWKIVPSTPAGP 76
           Q G+GS GALSH Y+ HP LRC+IP+  GLFYDDAN+ LI  T+ ++  W+  P  P  P
Sbjct: 6   QAGVGS-GALSHVYIHHPSLRCNIPESNGLFYDDANRLLICTTSSQVFSWETSPFNPDVP 64

Query: 77  PNSDPVNDGPVLSVRYSLDLKAIGIQRSNHEVEFINRETGQTCNKKCRADSETILGFFWT 136
           P+ D +++GP+LS+R+SLD KAI +QRS+ E++  NRET Q  N KC+A SE+ILGFFW+
Sbjct: 65  PSVDSISEGPILSIRFSLDKKAIAVQRSDCEIQLFNRETKQILNHKCKAGSESILGFFWS 124

Query: 137 DCPTCDVIIIKTSGLDLFAYEPQSNALHLVDSKKINVSWYFYTHESRLILLASGMQCTLF 196
           D P CD+ I+KTSG+DLFA +   N+L LV++KK NV+WY YTHE+RL+LLASG+QC  F
Sbjct: 125 DSPLCDLAIVKTSGMDLFACDSMLNSLRLVETKKANVNWYIYTHETRLVLLASGLQCKTF 184

Query: 197 TGYQFSAGGIVKLPKFEMTMTKSEANNKPVLAADDVHTVTVYGRIYCLQLDRVSMTLNLY 256
            G+Q S  G+V+LP+FEMTM +SE+N+KP+L+A D+H VTVYGRIYCLQ+DR +M L+LY
Sbjct: 185 NGFQLSTAGVVRLPRFEMTMARSESNSKPILSAGDLHLVTVYGRIYCLQVDREAMLLHLY 244

Query: 257 RFYRDAVVQQGTLPTYSSRIAVSAVDNIIMVHQIDAKVVILYDVFMDSYAPISAPLPLLV 316
           RFYRDAVVQQG+LP YSS+++V+ VDN+++VHQIDAKVVI+YD+F+DS AP+SAPLPLL 
Sbjct: 245 RFYRDAVVQQGSLPIYSSKLSVNVVDNLLLVHQIDAKVVIIYDLFVDSRAPVSAPLPLLW 304

Query: 317 RGLPSNNKXXXXXXXXXXXXYGG------TLYGEGWSFLIPDLVCDVENGLLWKLHLDLE 370
           RG   +                        +Y +GW+FL+PDL+ D  N +LWK+HLDLE
Sbjct: 305 RGYQVSETSSQAVNKEIESSESSTSNENIVMYEDGWTFLVPDLILDQTNKVLWKIHLDLE 364

Query: 371 AIAASTSDAPLILEFLQRRKSDPSMVKTLSLAIVRTIILERRPITMVAKAMDVVLDSYSR 430
           AI+AS+SD   +LEFLQRRK + +  K L L I R IILERRP T V +A+DV++ +YS 
Sbjct: 365 AISASSSDRTSLLEFLQRRKLEANKAKQLCLGIARAIILERRPATQVTQAIDVLVTAYSY 424

Query: 431 LMKMGGGLPAVRRTSEQNQQPGVQPGVNPDSASGDGNRPVQSNSEVEHGIANLAEHVDRT 490
            +K  G    ++  +     P   PG +PDS      R  QS S       N+ E V+  
Sbjct: 425 SVK-AGTYKEIKNENATASTP--TPGASPDS-----ERHRQSGS-------NIDEEVEMN 469

Query: 491 LLNTXXXXXXXXXXXXXXXXPDRKPQVLGQDSRPLASGTSTQHGSHVASVAVSPSEMFES 550
                                      L   S+        Q  S ++S A+SP E+++ 
Sbjct: 470 ---------------------------LSSGSQENMFCADEQQESQLSSPAISPDELYKF 502

Query: 551 VFVLVEDEMMADPAYLISIIMEFLRSVSRAGLKAPPNLFVMMTTLLARSNRYPEIALFVS 610
           VF  VE+ M+ +  YL++II EFLRS+S   LK   N++VM   LLA S R+ E++LF +
Sbjct: 503 VFTSVEEMMVEESEYLVAIITEFLRSISAEKLKVDLNIYVMTIKLLAYSKRFAELSLFTT 562

Query: 611 NKILEPSKELAMQLMELGQQHSPTRKLGVDMLRERGLHHDYVTALLQDGYHLEALRYARK 670
           NKI+EPSKE+A QL++ G+Q+   RKLG+DMLR+  LHHDY+++L+QDGY+LEALRYA+K
Sbjct: 563 NKIIEPSKEVAFQLLDSGRQNIRVRKLGLDMLRQLSLHHDYISSLVQDGYYLEALRYAQK 622

Query: 671 YKVITVQPVLFLEKAVAINSAQNLAAMLSFFSEFTPTFKTTSDYGRYRHILSE 723
           +KV +V+  +FLE A A N  Q+LAA+L   SE  P FK TS+Y  +  +L++
Sbjct: 623 HKVTSVRSSMFLEAAFASNDMQHLAAILRVLSELIPGFKETSEYYTFYGLLND 675



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,518,874
Number of extensions: 587448
Number of successful extensions: 1305
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1304
Number of HSP's successfully gapped: 2
Length of query: 725
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 619
Effective length of database: 8,200,473
Effective search space: 5076092787
Effective search space used: 5076092787
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)