Os10g0371000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pollen Ole e 1 allergen and extensin domain containing protein.
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Os10g0371000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pollen Ole e 1 allergen and extensin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.53 | 0.588 | 10.5 | -2.37 | 1.11 | 1.92 | 0.192 | -2.18 | -0.244 | 21 | 24.03 | 1286 | -- | -- |
| 161.94 | 0.593 | 10.4 | -1.84 | 0.987 | 1.81 | 0.094 | -- | -0.154 | 21.2 | 22.73 | 2441 | -- | -- |
| 156.63 | 0.583 | 10.5 | -2.36 | 1.11 | 1.91 | -- | -2.14 | -0.247 | 21 | 23.92 | 1286 | -- | -- |
| 158.44 | 0.586 | 10.4 | -1.82 | 1.07 | 1.73 | -- | -- | -0.163 | 20.9 | 23.12 | 1245 | -- | -- |
| 181.58 | 0.628 | 10.5 | -2.47 | -- | 2.62 | -- | -2.8 | -0.335 | -- | 23.26 | 865 | -- | -- |
| 259.65 | 0.755 | 10.4 | -1.21 | 1.22 | -- | 0.394 | -- | 0.189 | 21.8 | -- | -- | -- | -- |
| 260.24 | 0.755 | 10.4 | -1.22 | 1.22 | -- | -- | -- | 0.188 | 21.8 | -- | -- | -- | -- |
| 185.17 | 0.634 | 10.4 | -1.86 | -- | 2.38 | -- | -- | -0.184 | -- | 22.98 | 854 | -- | -- |
| 235.34 | 0.714 | 10.3 | -- | 1.1 | 1.29 | -- | -- | 0.375 | 21 | 26.43 | 1227 | -- | -- |
| 348.5 | 0.872 | 10.3 | -1.21 | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
| 299.78 | 0.81 | 10.3 | -- | 1.21 | -- | -- | -- | 0.325 | 21.7 | -- | -- | -- | -- |
| 269.07 | 0.764 | 10.3 | -- | -- | 1.97 | -- | -- | 0.117 | -- | 23.63 | 831 | -- | -- |
| 387.29 | 0.919 | 10.3 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.60 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 2 | 151.00 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 3 | 151.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 4 | 151.80 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 8 | 152.03 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 22 | 152.40 | radiation | 30 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 39 | 152.56 | radiation | 40 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 46 | 152.78 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 49 | 153.15 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 59 | 153.27 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 61 | 153.42 | radiation | 20 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 65 | 153.49 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 113 | 154.35 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 136 | 155.32 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 139 | 155.33 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 142 | 155.34 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 147 | 155.35 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 150 | 155.37 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 158 | 155.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 160 | 155.69 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 161 | 155.70 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 166 | 155.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 169 | 155.83 | radiation | 40 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 178 | 156.07 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 184 | 156.17 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 189 | 156.18 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 190 | 156.18 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 201 | 156.29 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 208 | 156.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 224 | 156.55 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 235 | 156.56 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 237 | 156.60 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 250 | 156.71 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 17 |
| 252 | 156.72 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 299 | 156.87 | radiation | 40 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 302 | 156.88 | humidity | 90 | 43200 | > th | dose dependent | sin | 17 | NA |
| 321 | 156.91 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 21 |
| 326 | 156.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 369 | 157.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 373 | 157.09 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 376 | 157.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 440 | 157.35 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 448 | 157.39 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 514 | 157.55 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 575 | 157.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 22 |
| 577 | 157.68 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 608 | 157.78 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 614 | 157.79 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 625 | 157.82 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 641 | 157.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 650 | 157.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 654 | 157.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 670 | 157.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 695 | 158.05 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 713 | 158.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 716 | 158.10 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 717 | 158.10 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 742 | 158.12 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 758 | 158.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 765 | 158.16 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 772 | 158.17 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 797 | 158.19 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 811 | 158.23 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 834 | 158.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 875 | 158.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 20 |
| 894 | 158.45 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 22 |
| 903 | 158.47 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 925 | 158.53 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 950 | 158.57 | radiation | 40 | 14400 | > th | dose independent | rect. | 8 | 1 |