Os10g0363300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acetyl-CoA carboxylase (EC 6.4.1.2) (Fragment).
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Os10g0363300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acetyl-CoA carboxylase (EC 6.4.1.2) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78 | 0.415 | 12.7 | -0.652 | 0.92 | -0.713 | -0.231 | 0.351 | 0.146 | 11.1 | 62.33 | 1211 | -- | -- |
| 78.18 | 0.412 | 12.7 | -0.636 | 0.924 | -0.685 | -0.192 | -- | 0.141 | 11.1 | 62 | 1207 | -- | -- |
| 78.21 | 0.412 | 12.7 | -0.658 | 0.922 | -0.713 | -- | 0.281 | 0.146 | 11.1 | 62.3 | 1210 | -- | -- |
| 78.34 | 0.412 | 12.7 | -0.647 | 0.922 | -0.69 | -- | -- | 0.14 | 11.1 | 62.7 | 1210 | -- | -- |
| 117.91 | 0.509 | 12.7 | -0.555 | -- | -0.443 | -- | 0.593 | -0.0261 | -- | 68 | 1561 | -- | -- |
| 93.84 | 0.454 | 12.7 | -0.507 | 0.819 | -- | -0.317 | -- | -0.0249 | 10.8 | -- | -- | -- | -- |
| 94.27 | 0.455 | 12.7 | -0.52 | 0.821 | -- | -- | -- | -0.0261 | 10.8 | -- | -- | -- | -- |
| 118.81 | 0.51 | 12.7 | -0.568 | -- | -0.443 | -- | -- | -0.0186 | -- | 70 | 1536 | -- | -- |
| 88.87 | 0.439 | 12.7 | -- | 0.92 | -0.588 | -- | -- | 0.189 | 11.1 | 64 | 1217 | -- | -- |
| 135.96 | 0.545 | 12.7 | -0.537 | -- | -- | -- | -- | -0.0312 | -- | -- | -- | -- | -- |
| 101.4 | 0.471 | 12.7 | -- | 0.825 | -- | -- | -- | 0.0319 | 10.9 | -- | -- | -- | -- |
| 127.31 | 0.527 | 12.7 | -- | -- | -0.431 | -- | -- | 0.044 | -- | 70 | 1536 | -- | -- |
| 143.57 | 0.559 | 12.7 | -- | -- | -- | -- | -- | 0.0284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.33 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 2 | 74.34 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 4 | 74.48 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 5 | 74.48 | radiation | 30 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 12 | 74.59 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 13 | 74.60 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 47 | 75.16 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 49 | 75.81 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 50 | 75.89 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 51 | 76.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 52 | 76.17 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 53 | 76.23 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 54 | 76.24 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 68 | 76.28 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 78 | 76.42 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 90 | 76.60 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 94 | 76.74 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 99 | 76.81 | humidity | 70 | 1440 | < th | dose independent | sin | 11 | NA |
| 101 | 76.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 113 | 76.86 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 131 | 77.01 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 132 | 77.03 | humidity | 70 | 1440 | > th | dose independent | sin | 10 | NA |
| 152 | 77.16 | humidity | 70 | 1440 | < th | dose dependent | sin | 11 | NA |
| 175 | 77.31 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 188 | 77.44 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 192 | 77.48 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 200 | 77.59 | radiation | 40 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 201 | 77.60 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 226 | 77.66 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 307 | 78.35 | radiation | 1 | 1440 | > th | dose dependent | sin | 11 | NA |
| 313 | 78.41 | humidity | 90 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 320 | 78.43 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 360 | 78.56 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 378 | 78.58 | radiation | 10 | 1440 | > th | dose independent | sin | 12 | NA |
| 379 | 78.58 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 384 | 78.60 | radiation | 40 | 1440 | < th | dose dependent | sin | 11 | NA |
| 410 | 78.67 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 18 |
| 457 | 78.75 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 496 | 78.91 | humidity | 90 | 4320 | > th | dose dependent | rect. | 3 | 12 |
| 499 | 78.94 | humidity | 90 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 622 | 79.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 623 | 79.32 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 633 | 79.35 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 679 | 79.48 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 694 | 79.50 | humidity | 70 | 1440 | < th | dose dependent | no | NA | NA |
| 695 | 79.50 | humidity | 70 | 1440 | < th | dose dependent | rect. | 6 | 14 |
| 746 | 79.50 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 752 | 79.51 | humidity | 90 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 775 | 79.53 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 883 | 79.63 | radiation | 1 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 895 | 79.65 | humidity | 90 | 4320 | > th | dose dependent | sin | 3 | NA |
| 933 | 79.70 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 959 | 79.72 | radiation | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 975 | 79.74 | radiation | 40 | 1440 | < th | dose dependent | rect. | 7 | 2 |