Os10g0361000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipoxygenase, LH2 domain containing protein.
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Os10g0361000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipoxygenase, LH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 483.51 | 1.03 | 4.34 | -2.48 | 0.43 | -2.97 | -1.46 | 9.75 | -0.51 | 17.7 | 25.4 | 6331 | -- | -- |
| 521.8 | 1.06 | 4.58 | -2.92 | 0.474 | -3.21 | -1.66 | -- | -0.574 | 17.7 | 21.99 | 28289 | -- | -- |
| 488.7 | 1.03 | 4.35 | -2.47 | 0.426 | -2.97 | -- | 9.77 | -0.513 | 17.4 | 25.4 | 6317 | -- | -- |
| 506.42 | 1.05 | 4.48 | -2.08 | 0.308 | -4.34 | -- | -- | -0.166 | 16.3 | 21.1 | 28390 | -- | -- |
| 478.76 | 1.02 | 4.25 | -2.04 | -- | -3.13 | -- | 9.91 | -0.0717 | -- | 25.1 | 10827 | -- | -- |
| 776.91 | 1.31 | 4.91 | -6.75 | 0.402 | -- | -1.02 | -- | -2.04 | 16.5 | -- | -- | -- | -- |
| 779.31 | 1.31 | 4.91 | -6.76 | 0.398 | -- | -- | -- | -2.04 | 15.7 | -- | -- | -- | -- |
| 490.26 | 1.03 | 4.41 | -0.324 | -- | -5.78 | -- | -- | 0.182 | -- | 19.06 | 47520 | -- | -- |
| 485.76 | 1.03 | 4.39 | -- | 0.309 | -5.99 | -- | -- | 0.278 | 15.8 | 19.1 | 47520 | -- | -- |
| 788.07 | 1.31 | 4.91 | -6.78 | -- | -- | -- | -- | -2.05 | -- | -- | -- | -- | -- |
| 1983.86 | 2.08 | 4.74 | -- | 0.531 | -- | -- | -- | -1.29 | 15.6 | -- | -- | -- | -- |
| 490.85 | 1.03 | 4.39 | -- | -- | -6 | -- | -- | 0.278 | -- | 19.08 | 47520 | -- | -- |
| 1999.55 | 2.09 | 4.74 | -- | -- | -- | -- | -- | -1.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 398.56 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 2 | 398.62 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 3 | 398.62 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 29 | 442.21 | humidity | 80 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 36 | 446.78 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 39 | 448.66 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 46 | 452.13 | temperature | 20 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 50 | 453.55 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 63 | 455.73 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 66 | 456.24 | temperature | 25 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 71 | 456.76 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 90 | 458.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 92 | 459.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 108 | 461.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 132 | 462.81 | temperature | 20 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 150 | 464.46 | temperature | 20 | 14400 | < th | dose dependent | rect. | 15 | 11 |
| 172 | 465.38 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 181 | 465.84 | temperature | 25 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 185 | 466.04 | temperature | 20 | 14400 | < th | dose dependent | sin | 17 | NA |
| 247 | 467.67 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 257 | 467.85 | temperature | 25 | 14400 | > th | dose independent | sin | 23 | NA |
| 268 | 467.99 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 285 | 468.30 | temperature | 25 | 14400 | < th | dose independent | sin | 0 | NA |
| 395 | 469.64 | temperature | 20 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 435 | 470.03 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 525 | 470.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 722 | 472.94 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 777 | 473.52 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 796 | 473.74 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |
| 830 | 474.13 | wind | 3 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 832 | 474.15 | temperature | 25 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 847 | 474.33 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 852 | 474.36 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 885 | 474.74 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 901 | 474.74 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 925 | 474.84 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 993 | 475.47 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 998 | 475.49 | temperature | 20 | 14400 | > th | dose dependent | rect. | 11 | 2 |