Os10g0346200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os10g0346200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.45 | 0.191 | 9.87 | -0.432 | 0.27 | -0.777 | 0.183 | -0.504 | 0.0169 | 2.33 | 23.96 | 10 | -- | -- |
| 16.7 | 0.192 | 9.88 | -0.5 | 0.265 | -0.724 | 0.00559 | -- | 0.0034 | 2.52 | 23.96 | 10 | -- | -- |
| 16.42 | 0.19 | 9.87 | -0.449 | 0.269 | -0.796 | -- | -0.42 | 0.0189 | 2.48 | 23.5 | 10 | -- | -- |
| 16.7 | 0.192 | 9.88 | -0.5 | 0.265 | -0.725 | -- | -- | 0.00338 | 2.53 | 23.94 | 8 | -- | -- |
| 20.23 | 0.211 | 9.87 | -0.42 | -- | -0.635 | -- | -0.291 | 0.0478 | -- | 23.25 | 6 | -- | -- |
| 24.03 | 0.23 | 9.85 | -0.339 | 0.164 | -- | -0.105 | -- | 0.118 | 3.99 | -- | -- | -- | -- |
| 24.06 | 0.23 | 9.85 | -0.338 | 0.162 | -- | -- | -- | 0.118 | 3.75 | -- | -- | -- | -- |
| 20.37 | 0.211 | 9.87 | -0.453 | -- | -0.594 | -- | -- | 0.04 | -- | 23.4 | 2 | -- | -- |
| 22.68 | 0.223 | 9.86 | -- | 0.225 | -0.556 | -- | -- | 0.0901 | 2.71 | 23.4 | 10 | -- | -- |
| 25.52 | 0.236 | 9.86 | -0.331 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 27.07 | 0.243 | 9.85 | -- | 0.156 | -- | -- | -- | 0.156 | 3.77 | -- | -- | -- | -- |
| 25.38 | 0.235 | 9.86 | -- | -- | -0.453 | -- | -- | 0.111 | -- | 23.03 | 6 | -- | -- |
| 28.41 | 0.249 | 9.85 | -- | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.31 | temperature | 10 | 10 | > th | dose dependent | sin | 12 | NA |
| 3 | 15.33 | temperature | 30 | 10 | < th | dose dependent | sin | 12 | NA |
| 30 | 15.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 50 | 16.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 65 | 16.13 | temperature | 10 | 720 | > th | dose dependent | sin | 17 | NA |
| 96 | 16.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 107 | 16.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 114 | 16.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 128 | 16.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 133 | 16.35 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 172 | 16.42 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 232 | 16.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 375 | 16.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 410 | 16.68 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 16 |
| 420 | 16.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 423 | 16.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 434 | 16.69 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 450 | 16.71 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 459 | 16.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 470 | 16.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 477 | 16.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 483 | 16.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 523 | 16.77 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 18 |
| 558 | 16.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 573 | 16.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 586 | 16.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 690 | 16.92 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 21 |